Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20capensis_20[genbank_20GCA_5F001510575.1_202016-01-11]
29 sequences; 35,537,816 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq2 123 4e-23
>seq2
Length=2210479
Score = 123 bits (136), Expect = 4e-23
Identities = 275/413 (67%), Gaps = 0/413 (0%)
Strand=Plus/Minus
Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCAT 76608
||| || || || || || ||||||| | |||||| | | | || || || |||||
Sbjct 1077594 ACCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCGGCGTTCTTCTCGACTCGCTTCAT 1077535
Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668
|||||||| || ||||| ||||| | || | ||||| || | || || |||||
Sbjct 1077534 GAAGAGATCGGGGATCCACAGAGCCAGGAACAAATCTCTGGCGCGGACCTCCTCCTTTCC 1077475
Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728
|||||| ||||| | |||||| | | || | ||||| || || || || ||
Sbjct 1077474 ATGATTCTTGCGCAGATCCATGAACTCGAACACGTCGGCGTGCCACGGCTCGAGGTAGAT 1077415
Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788
|| | | || || || || || || ||||| || | ||| | ||| ||||| || |
Sbjct 1077414 GGCAAAGGCGCCGGGGCGCTTGTTGCCGCCCTGGTCAACATAGCGGGCGGTGTTGTTGAA 1077355
Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848
|| | | ||| || || || || || || || ||||| ||||| | ||||||| ||
Sbjct 1077354 CACGCGAAGCATGGGGATGATACCATTGGACGTGCCATTGGTTCCGGCAATATAAGAACC 1077295
Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908
||||| ||| | | || || || || || ||||| || ||||| | ||
Sbjct 1077294 GGTAGCACGGATACGGTGGACATTGAGACCAATGCCACCAGCCATCTTGGAGATCATGGC 1077235
Query 76909 ACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAA 76961
||| || | ||||||||||| ||||| || || |||||| |||||| ||
Sbjct 1077234 GCAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTCATGTCAA 1077182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712934141561280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |