Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq60 150 2e-31
>seq60
Length=1285956
Score = 150 bits (166), Expect = 2e-31
Identities = 448/686 (65%), Gaps = 14/686 (2%)
Strand=Plus/Plus
Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055
|| ||||||| | |||||| ||| | || || || ||||| ||||||||||| |||
Sbjct 693661 GGGCACATCAGAGTCCACTCGGCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATC 693720
Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 54115
|| ||||| | || | |||||||| | ||||| ||||| ||||| |||
Sbjct 693721 CACAGAGCCAGGAACAAATCTCTGGCGCGGACCTCCTCCTTTCCATGGTTCTTGCGCAGA 693780
Query 54116 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGC 54175
|| | |||| | | | ||| | |||||||| || | || |||| | | || ||
Sbjct 693781 TCCATGAACTCGAACACATCGGCGTGCCACGGCTCGAGATAGATGGCAAAGGCGCCGGGG 693840
Query 54176 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 54235
|| ||||| || ||||| || | || | |||||||| || | |||| | ||| ||
Sbjct 693841 CGCTTGTTGCCACCCTGGTCAACATAGCGCGCGGTGTTGTTGAACACTCGAAGCATGGGG 693900
Query 54236 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--T 54293
|| ||||||||||| | |||||||| |||| ||||| ||| | ||||| |||
Sbjct 693901 ATGATACCATTGGACGTGCCATTGGTTCCGGCAATATAAGAACCAGTAGCACGGATACGG 693960
Query 54294 TACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 54353
| |||| ||||| || || || ||||| || ||||| | ||||| || | |
Sbjct 693961 TGGACATTG--AGACCAATGCCGCCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGG 694018
Query 54354 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 54413
| |||||||| ||||| || || |||||| | || | || || || || || | |
Sbjct 694019 TGTCATAGATACCCTCAATGCTGTCATCCTTTATATCAACCAGGAAGCACGACGAGAGCT 694078
Query 54414 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 54473
|| | || || || || || | ||| || || || || || || | || |
Sbjct 694079 GGGCCTGCGGGGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGG 694138
Query 54474 AAAGTAGATTGTACGTCTCGAT----AGCT-GAGTCTATATCCCATTGATGAATTCCTAC 54528
| | | ||||| ||||| || ||| || | | |||| |||| || ||
Sbjct 694139 ACATCAAGTTGTAGGTCTCAATGACGCGCTCGACGTTGTCTCCC-CAGATG----CCAAC 694193
Query 54529 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAA 54588
|| |||||||| | ||||||||| || | || || |||||| || | || ||||
Sbjct 694194 AGCAACACGCATGATCATGTGCTGGGGGCGCTCGACAATCTTGCCGTCAAGCTTGAGCAG 694253
Query 54589 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 54648
||| || |||| || || || ||||| || | ||| ||||| || ||||| |
Sbjct 694254 GTAAGACCGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCCCGGTCGTAGAC 694313
Query 54649 AATAACTGAGTTGAGTTTATCCTTAT 54674
||| | |||| || | |||||||
Sbjct 694314 AATGGCCGAGTCCAGCTCCTCCTTAT 694339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593720612937840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |