Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq60 163 4e-35
>seq60
Length=1285956
Score = 163 bits (180), Expect = 4e-35
Identities = 451/686 (66%), Gaps = 14/686 (2%)
Strand=Plus/Plus
Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086
|| ||||||| | |||||| ||| | || || || ||||| ||||||||||| |||
Sbjct 693661 GGGCACATCAGAGTCCACTCGGCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATC 693720
Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146
|| ||||| | || |||||||||| | ||||| ||||| ||||| |||
Sbjct 693721 CACAGAGCCAGGAACAAATCTCTGGCGCGGACCTCCTCCTTTCCATGGTTCTTGCGCAGA 693780
Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206
|| | |||| | | | ||| |||||||| || | || ||||| | | || ||
Sbjct 693781 TCCATGAACTCGAACACATCGGCGTGCCACGGCTCGAGATAGATGGCAAAGGCGCCGGGG 693840
Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266
|| ||||| || ||||| || | || | |||||||| || | |||| | ||| ||
Sbjct 693841 CGCTTGTTGCCACCCTGGTCAACATAGCGCGCGGTGTTGTTGAACACTCGAAGCATGGGG 693900
Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATA--T 66324
|| ||||||||||| || |||||||| |||| ||||| ||| | ||||| |||
Sbjct 693901 ATGATACCATTGGACGTGCCATTGGTTCCGGCAATATAAGAACCAGTAGCACGGATACGG 693960
Query 66325 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 66384
| |||| ||||| || || || ||||| || ||||| | ||||| || | |
Sbjct 693961 TGGACATTG--AGACCAATGCCGCCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGG 694018
Query 66385 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 66444
| |||||||| ||||| || || |||||| | || | || || || || || | |
Sbjct 694019 TGTCATAGATACCCTCAATGCTGTCATCCTTTATATCAACCAGGAAGCACGACGAGAGCT 694078
Query 66445 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 66504
|| | || || || || || | ||| || || || || || || | || |
Sbjct 694079 GGGCCTGCGGGGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGG 694138
Query 66505 AAAGTAGATTGTACGTCTCAAT----AGCT-GAGTCTATATCCCATTGATGAATTCCTAC 66559
| | | ||||| |||||||| ||| || | | |||| |||| || ||
Sbjct 694139 ACATCAAGTTGTAGGTCTCAATGACGCGCTCGACGTTGTCTCCC-CAGATG----CCAAC 694193
Query 66560 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 66619
|| |||||||| | ||||||||| || | || || |||||| || | || | ||
Sbjct 694194 AGCAACACGCATGATCATGTGCTGGGGGCGCTCGACAATCTTGCCGTCAAGCTTGAGCAG 694253
Query 66620 GTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAAT 66679
||| || |||| || || || ||||| || | ||| ||||| || ||||| |
Sbjct 694254 GTAAGACCGCTCCAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCCCGGTCGTAGAC 694313
Query 66680 AATAACCGAGTTGAGTTTATCCTTAT 66705
||| |||||| || | |||||||
Sbjct 694314 AATGGCCGAGTCCAGCTCCTCCTTAT 694339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658171705787720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |