Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_005261.2
Length=137821
Score E
Sequences producing significant alignments: (Bits) Value
seq112 129 5e-25
>seq112
Length=899235
Score = 129 bits (142), Expect = 5e-25
Identities = 318/461 (69%), Gaps = 31/461 (7%)
Strand=Plus/Plus
Query 99328 AAGTGCGTGCAGGTGACGAAGGGC--GCCCGCG-ACAGCGGCGAGGGGTGG-CTGTGCGT 99383
||||||| || |||| |||| | | | ||| |||||||||||||||| | | |||
Sbjct 127895 AAGTGCGCACACGTGAAGAAGCCCTTGGCGGCGGACAGCGGCGAGGGGTGCACGGCGCG- 127953
Query 99384 CAGCACGAGGTGCCGCTTCCCGGCCGCCCCAAAGGCCCGCTGG---GCGTGCGCGCCCCA 99440
|||||||||||| ||||| || | || | | | |||| | ||| | | ||||||
Sbjct 127954 CAGCACGAGGTGGCGCTTGGCGTCGACCTTGACGACGCGCTTGCCGGCGGGGGTGCCCCA 128013
Query 99441 GAGCATGAACACCAT--CG-GGCCGCCCTGCGCGCTCAGGCGGGCCAGCACCGCG-TGCA 99496
| ||||||||| | || || || | ||| | | || | | || ||| ||
Sbjct 128014 GGCCATGAACACGACGCCGCGGGGGCGGCGGGCGGCGACGAGGTCGATGAC-GCGCTGGG 128072
Query 99497 CCAGCCGCCCCCAGCCCAGGCTGGCGTGCGAGCCCGGCGCCCCGCTCCGCACGGTGAGCG 99556
| ||| ||||||| || ||||||||||| | | | | |||||||| ||
Sbjct 128073 TGAAGCGCTCCCAGCCGCGGTTGGCGTGCGAGTTGGCCTCGTGGGCGCGCACGGTCAGGC 128132
Query 99557 AGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCA-GGCCTC--CAGGCAGCCGTGCTGCG 99613
| |||||||| |||||||||||||| ||||||| ||| || ||||| | || | | ||
Sbjct 128133 ACGTGTTGAGGAGCAGCACGCCGCGCTGCGCCCACGGCGTCAGCAGGCCGGCGCGGTTCG 128192
Query 99614 GCCGCG---GGGTCCCGGGGAAGTTCTTCTGCACGGCCGC-GTAGATGTTCTGGAGGCTG 99669
|| || || |||| | ||| || ||| ||| | ||| ||||| | ||
Sbjct 128193 GCGGCTCGCGGAAGCCGGCGTAGTCGTTGCGCA-GGCAGATGTACATGTTGCGCAGCGAC 128251
Query 99670 GGCGGGATCGGAACGCCG-CGGTT-CACGCTGAAGGCCAGGCCGTGGGCCTG---CCCGT 99724
|||||| ||| || || ||| ||||||||||||||| ||||| ||||| | |||
Sbjct 128252 GGCGGGGCCGG--CGTCGGCGGCCGCACGCTGAAGGCCAGCCCGTGCGCCTGGTTCACGT 128309
Query 99725 GGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACG 99765
||||||||||||||||||| | |||||| |||||||||
Sbjct 128310 ---TGTGGTAGGGGTCCTGGCCGACGATGACCACCTTGACG 128347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 440898467005080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |