Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= NC_005261.2 Length=137821 Score E Sequences producing significant alignments: (Bits) Value seq112 129 5e-25 >seq112 Length=899235 Score = 129 bits (142), Expect = 5e-25 Identities = 318/461 (69%), Gaps = 31/461 (7%) Strand=Plus/Plus Query 99328 AAGTGCGTGCAGGTGACGAAGGGC--GCCCGCG-ACAGCGGCGAGGGGTGG-CTGTGCGT 99383 ||||||| || |||| |||| | | | ||| |||||||||||||||| | | ||| Sbjct 127895 AAGTGCGCACACGTGAAGAAGCCCTTGGCGGCGGACAGCGGCGAGGGGTGCACGGCGCG- 127953 Query 99384 CAGCACGAGGTGCCGCTTCCCGGCCGCCCCAAAGGCCCGCTGG---GCGTGCGCGCCCCA 99440 |||||||||||| ||||| || | || | | | |||| | ||| | | |||||| Sbjct 127954 CAGCACGAGGTGGCGCTTGGCGTCGACCTTGACGACGCGCTTGCCGGCGGGGGTGCCCCA 128013 Query 99441 GAGCATGAACACCAT--CG-GGCCGCCCTGCGCGCTCAGGCGGGCCAGCACCGCG-TGCA 99496 | ||||||||| | || || || | ||| | | || | | || ||| || Sbjct 128014 GGCCATGAACACGACGCCGCGGGGGCGGCGGGCGGCGACGAGGTCGATGAC-GCGCTGGG 128072 Query 99497 CCAGCCGCCCCCAGCCCAGGCTGGCGTGCGAGCCCGGCGCCCCGCTCCGCACGGTGAGCG 99556 | ||| ||||||| || ||||||||||| | | | | |||||||| || Sbjct 128073 TGAAGCGCTCCCAGCCGCGGTTGGCGTGCGAGTTGGCCTCGTGGGCGCGCACGGTCAGGC 128132 Query 99557 AGGTGTTGAGCAGCAGCACGCCGCGGCGCGCCCA-GGCCTC--CAGGCAGCCGTGCTGCG 99613 | |||||||| |||||||||||||| ||||||| ||| || ||||| | || | | || Sbjct 128133 ACGTGTTGAGGAGCAGCACGCCGCGCTGCGCCCACGGCGTCAGCAGGCCGGCGCGGTTCG 128192 Query 99614 GCCGCG---GGGTCCCGGGGAAGTTCTTCTGCACGGCCGC-GTAGATGTTCTGGAGGCTG 99669 || || || |||| | ||| || ||| ||| | ||| ||||| | || Sbjct 128193 GCGGCTCGCGGAAGCCGGCGTAGTCGTTGCGCA-GGCAGATGTACATGTTGCGCAGCGAC 128251 Query 99670 GGCGGGATCGGAACGCCG-CGGTT-CACGCTGAAGGCCAGGCCGTGGGCCTG---CCCGT 99724 |||||| ||| || || ||| ||||||||||||||| ||||| ||||| | ||| Sbjct 128252 GGCGGGGCCGG--CGTCGGCGGCCGCACGCTGAAGGCCAGCCCGTGCGCCTGGTTCACGT 128309 Query 99725 GGCTGTGGTAGGGGTCCTGGCCCAGGATGACGACCTTGACG 99765 ||||||||||||||||||| | |||||| ||||||||| Sbjct 128310 ---TGTGGTAGGGGTCCTGGCCGACGATGACCACCTTGACG 128347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440898467005080