Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= NC_006151.1 Length=143461 Score E Sequences producing significant alignments: (Bits) Value seq112 111 1e-19 >seq112 Length=899235 Score = 111 bits (122), Expect = 1e-19 Identities = 246/356 (69%), Gaps = 25/356 (7%) Strand=Plus/Plus Query 94079 GCGTGGGCGCCCCAGAGCATGAACACCA-GCTTGGGGCGGGTCTCGCAGAGCCGCTGGAC 94137 ||| ||| ||||||| ||||||||| | || ||| | | | || | | || || | Sbjct 128000 GCGGGGGTGCCCCAGGCCATGAACACGACGCCGCGGGGGCGGCGGGCGGCGACGA-GGTC 128058 Query 94138 GACGGCGCGCACG---AGCCGCGCCCAGCCGAGCGGGGCGTGGGAGCCGGGGACCCCGCG 94194 || | ||||| | | ||| |||||||| | |||||| ||| || || || | Sbjct 128059 GATGACGCGCTGGGTGAAGCGCTCCCAGCCGCGGTTGGCGTGCGAGTTGG---CCTCGTG 128115 Query 94195 C---CGCACGGTCAGCGTCGTGTTCAGCAGCAGCACCCCGCGGCGCGCCCA-GGCCTC-- 94248 ||||||||||| |||||| || |||||||| ||||| ||||||| ||| || Sbjct 128116 GGCGCGCACGGTCAGGCACGTGTTGAGGAGCAGCACGCCGCGCTGCGCCCACGGCGTCAG 128175 Query 94249 CAGGCAGCCGTGGGCGGGCG---CG-GGCAGCGTCGG-GTA--CGTCGCCCGGACCGCCG 94301 ||||| | || || |||| || || ||| ||| ||| ||| || | | | | | Sbjct 128176 CAGGCCGGCGCGGTTCGGCGGCTCGCGGAAGC--CGGCGTAGTCGTTGCGCAGGCAGATG 128233 Query 94302 CGAAGATGTTGGCCAGGCTCGGGGGGATCGGCACCCCGCGCCGGACGCTGAAGGCCAGCC 94361 | |||||| ||| ||| ||| |||| | |||| |||||||||||||||| Sbjct 128234 T--ACATGTTGCGCAGCGACGGCGGGGCCGGCGTCGGCGGCCGCACGCTGAAGGCCAGCC 128291 Query 94362 CGTGGGCCTGGCCCGGCCCGTGGTACGGGTCCTGGCCGATGATGACCACCTTGACG 94417 |||| |||||| | |||||| ||||||||||||| |||||||||||||||| Sbjct 128292 CGTGCGCCTGGTTCACGTTGTGGTAGGGGTCCTGGCCGACGATGACCACCTTGACG 128347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 458946437000280