Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq101 91.5 1e-13
>seq101
Length=737149
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || || || || | ||| || || || ||| | ||||||
Sbjct 589971 CACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCCTC 589912
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || ||||||||| | |||||||| |||||||| || || || || |
Sbjct 589911 AAGCTGCTTGCCAGCAAAGATTAGGCGCTGCTGATCCGGAGGAATGCCCTCCTTATCCTG 589852
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || | ||||||| ||| ||| || | || || || | |||||||| ||
Sbjct 589851 GATCTTCGACTTGACGTTATCGATAGTATCCGACGACTCCACCTCGAGGGTGATGGTCTT 589792
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || |||||||||||
Sbjct 589791 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 589762
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| || || ||||| || | ||| || || || ||| | ||||||
Sbjct 590199 CACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTC 590140
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| ||||| | ||||| | | |||||||| || || || || || || || |
Sbjct 590139 GAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTATCCTG 590080
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || | ||| ||| | ||| || || | ||||| || | |||||||| ||
Sbjct 590079 GATCTTCGACTTCACGTTGTCGATGGTATCCGACGACTCGACCTCCAGAGTGATGGTCTT 590020
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| || || || || || ||||||||
Sbjct 590019 GCCAGTCAGGGTCTTGACGAAAATCTGCAT 589990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290454715880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |