Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq68 116 6e-22
seq49 107 3e-19
>seq68
Length=963626
Score = 116 bits (128), Expect = 6e-22
Identities = 89/103 (86%), Gaps = 2/103 (2%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||||||| |||| |||||| || ||||| || || ||||||||||| ||||
Sbjct 191868 CGCCAAGCGTCATCGCAAGAT-TCTTCGTGACAACATTCAGGGTATCACCAAGCCCGCTA 191926
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGG 16533
|||||||||| ||||||||||| || ||||||||| |||| ||
Sbjct 191927 TCCGTCGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCCGG 191969
>seq49
Length=537947
Score = 107 bits (118), Expect = 3e-19
Identities = 87/103 (84%), Gaps = 2/103 (2%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||||||||||| ||| ||| || || ||||| || || ||||||||||| ||||
Sbjct 504897 CGCCAAGCGTCATCGCAAGAT-TCTCCGTGACAACATTCAGGGTATCACCAAGCCCGCTA 504839
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGG 16533
|||| |||||||| |||||||| || ||||||||| |||| ||
Sbjct 504838 TCCGCCGTCTGGCCCGTCGTGGCGGTGTCAAGCGTATCTCCGG 504796
Score = 80.6 bits (88), Expect = 4e-11
Identities = 88/117 (75%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 16583 GTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATG 16642
|| |||| ||| || || ||| ||||||||||| || || ||||| |||||||| |
Sbjct 504673 GTCATCCGTGACGCCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCGCTC 504614
Query 16643 GATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| |||||||||| |||| || || ||||||| | || ||||| || |||||
Sbjct 504613 GATGTCGTCTATGCTCTGAAGCGCCAGGGCCGTACCCTGTACGGTTTCGGTGGTTAA 504557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075078397169
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |