Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq60 354 2e-92
>seq60
Length=1285956
Score = 354 bits (392), Expect = 2e-92
Identities = 1136/1737 (65%), Gaps = 38/1737 (2%)
Strand=Plus/Minus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501
||||| || ||||| ||||| ||| | |||||||||||| |||| ||| | |
Sbjct 694232 ATTGTCGAGCGCCCCCAGCACATGATCATGCGTGTTGCTGTTGGCATCTGGGGAGACAAC 694173
Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCC 363558
|| || || ||||| || || || ||| | || || || | ||||| || |||
Sbjct 694172 GTCGAGCGCGTCATTGAGACCTACAA-CTTG-ATGTCCAGCAAGT-TCTTCACCCATGCC 694116
Query 363559 ACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTA 363618
| || || | | ||| ||||| || | | | ||| | || || ||||| || |
Sbjct 694115 TCCCCCACCCTCTTCAACGCTGGTACCCCGCAGGCCCAGCTCTCGTCGTGCTTCCTGGTT 694056
Query 363619 AAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATT 363678
| || ||||| || ||| |||||||||| |||||| || |||| || || | ||
Sbjct 694055 GATATAAAGGATGACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGCGCCATGATC 693996
Query 363679 TCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTA 363737
||||||| || ||||| |||||| | ||||| | | ||||| || | |||
Sbjct 693995 TCCAAGATGGCTGGCGGCATTGGTCTCAATGTCCACCGTATCCGTGCTACTGGTTC-TTA 693937
Query 363738 CATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAA 363797
||| ||| || || || ||||| | | ||||||||||| ||||| ||||
Sbjct 693936 TATTGCCGGAACCAATGGCACGTCCAATGGTATCATCCCCATGCTTCGAGTGTTCAACAA 693877
Query 363798 TACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCT 363857
|| ||| | || || ||||||||||| |||||| || || ||||| || |||||
Sbjct 693876 CACCGCGCGCTATGTTGACCAGGGTGGCAACAAGCGCCCCGGCGCCTTTGCCATCTATCT 693817
Query 363858 CGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGA 363917
|||||| || |||||| | || ||||| | || || || || ||| ||||| ||
Sbjct 693816 CGAGCCGTGGCACGCCGATGTGTTCGAGTTCATGGATCTGCGCAAGAACCATGGAAAGGA 693757
Query 363918 GGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCG 363977
||| | || || | ||| ||||| || || ||| | |||| | || ||||||||
Sbjct 693756 GGAGGTCCGCGCCAGAGATTTGTTCCTGGCTCTGTGGATCCCTGATCTCTTCATGAAGCG 693697
Query 363978 CGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC 364035
|| ||| | | | | | ||| | || | ||||| |||| || || |||||| ||
Sbjct 693696 TGTCGAG--AAGAACGCCGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGTCTTGCC 693639
Query 364036 GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095
|| | || || || | | || || ||||| ||||| || | ||||| | |
Sbjct 693638 GACTGCTACGGCGAGGAGTTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGTCGCGGT 693579
Query 364096 CGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACA 364155
|| ||||| || || |||||||| |||| ||||||| | || | |||| |||||
Sbjct 693578 CGCAAGACCATCAAGGCTCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACC 693519
Query 364156 GGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTT 364215
|| | |||| ||| ||||||| || || ||||||||| ||||||| || ||||
Sbjct 693518 GGCAACCCCTTCATGCTGTACAAGGACCACTGTAACCGCAAGAGCAACCAGAAGAACCTG 693459
Query 364216 GGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGA 364274
||||| |||| |||| |||||| || || ||||| ||||| ||| ||||||||| ||
Sbjct 693458 GGTACCATTC-GCAGCTCCAACCTGTGCACTGAGATCATTGAGTACTGCGCTCCCGATGA 693400
Query 364275 GACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG-----TAAAAGATGGT 364329
| || || || ||||| || || |||| || || || | || || || | ||
Sbjct 693399 GGTGGCTGTGTGCAACCTGGCCTCCCTCGCTCTGCCCGCCTATGTTGACTACAACAAGGG 693340
Query 364330 ACT-TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT-TGCAATCTCGACA 364387
| | |||| || | || | || || ||| || || | | |||| || ||
Sbjct 693339 CGTGTATGACTTTGAGAAGCTGCACGAGGTCACC-ATGGTGGTTGTCCGCAACCTGAACC 693281
Query 364388 AGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCG 364442
| || || || | || || | || || || || ||| || |||||
Sbjct 693280 GCATCATTGATGTCAACCACTACCCCGTGCCCGAGGCTCGCAACAGC-----AACATGCG 693226
Query 364443 TCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGAT 364502
|| ||||| || ||| ||||||| ||||| || ||||| | ||| | || ||
Sbjct 693225 CCACCGCCCCATCGGTGTTGGTGTTCAGGGTCTGGCTGATGCTTTCCTCGCTCTGCGCAT 693166
Query 364503 GGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTT 364562
| | ||||| || | || ||||| | || || || ||||||| || || || ||
Sbjct 693165 GCCCTTTGAGTCCGCCGAGGCTCGGGAGCTGAACCAGCAGATCTTCGAGACCATCTACCA 693106
Query 364563 TGCCGCAATGACTG-CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATG 364621
|| || || | | || |||| || | || || |||||| ||||| || ||||
Sbjct 693105 CGCTGCTCTGTCGGCCTCCGTG-GAGATCGCCAAGGAGGAGGGAACCTACTCCACCTATG 693047
Query 364622 AGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTG 364681
|||| || || | || ||||| | | |||||||| | |||||||||| ||| | |
Sbjct 693046 AGGGCTCTCCCGTCTCTCAGGGTATCCTGCAGTTTGACATGTGGAATGTCAAGCCCACCG 692987
Query 364682 TCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCC 364740
|| ||| ||||||||| || | | | | | ||| || ||| |||||||
Sbjct 692986 ACCTCTGGGACTGGGATAGCCTGAAGGAGC-AGATCAAGCTTCACGGTGTTCGCAACAGT 692928
Query 364741 CTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGC 364800
|| | || ||||||||||| || ||| | ||||| || || ||||||||||||
Sbjct 692927 CTGCTGCTGGCTCCCATGCCCACTGCCAGTACCTCGCAGATTCTTGGCAACAACGAGTGC 692868
Query 364801 TTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTA 364860
|| || |||| || ||| | || ||||| || ||| | ||||| || | |||
Sbjct 692867 TTTGAGCCGTACACCTCCAACATCTACCAGCGCCGTGTGCTTGCTGGAGAGTTCCAGGTG 692808
Query 364861 GTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAG 364920
|| || || | || ||||| ||||| || |||||| ||| ||||||
Sbjct 692807 GTCAACCCGTGGTTGCTCCGCGATCTCGTCGACCTTGGCCTGTGGTCGGACTCGATGAAG 692748
Query 364921 AACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT-CCAGGATTTCCAGAAGATCT 364979
||| ||||| |||| || || || | ||||||||| |||| | | || | || |
Sbjct 692747 AACCGCATCATTGCCGACAACGGCTCGATCCAGAACATTGCCAGCA-TCCCTGCTGACAT 692689
Query 364980 GAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGC 365039
||| || | ||||| || || |||||||||||| ||| ||| | | | ||||| ||
Sbjct 692688 CAAGGCTCTGTACAAGACGGTCTGGGAAATTTCCCAGCGCACTGTTGTGCAGATGGCAGC 692629
Query 365040 CGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAAC 365099
||| || |||||||| || ||| ||||| | ||| | ||||| | || ||
Sbjct 692628 CGACCGTGGTGCTTTCATTGACCAGTCGCAGTCTCTGAACATCCACATGAAGGACCCCAC 692569
Query 365100 CTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
| |||| | || |||||| ||| ||| ||||| ||||| ||||| ||
Sbjct 692568 GATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGCTTGGTCTCAAGACCGG 692512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303351379004006
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