Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq60 470 3e-127
seq58 432 7e-116
>seq60
Length=1285956
Score = 470 bits (520), Expect = 3e-127
Identities = 1242/1883 (66%), Gaps = 59/1883 (3%)
Strand=Plus/Plus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||| | || || | || |||| ||| | ||||||||||||||||||||||| |
Sbjct 692465 TGAACTGAATAGGCGCCGCAGCAGCCTGGGTACGGAGGTAGTACATGCCGGTCTTGAGAC 692524
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
|| |||| || || ||||||| || | ||| |||| || | ||
Sbjct 692525 CAAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATCGTGGG---------GT 692575
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920
||| || || ||| || ||||| |||||| | ||| | | || || || |
Sbjct 692576 CCTT---CATGTGGATGTTCAGAGACTGCGACTGGTCAATGAAAGCACCACGGTCGGCTG 692632
Query 243921 CCATGGTGATGAG-GTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGG 243979
|||| | | || | ||| || || || | |||||||||| | | ||||| |
Sbjct 692633 CCATCTGCACAACAGTGCG-CTGGGAAATTTCCCAGACCGTCTTGTACAGAGCCTTGATG 692691
Query 243980 TGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGC 244039
| | |||| | | |||||||| | |||||| |||| | | |||| || | |
Sbjct 692692 TCAGCAGGGATGCTGGCAATGTTCTGGATCGAGCCGTTGTCGGCAATGATGCGGTTCTTC 692751
Query 244040 ATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACC 244099
|| || ||||||||| | | | || | || || | ||| ||||||
Sbjct 692752 ATCGAGTCCGACCACAGGCCAAGGTCGACGAGATCGCGGAGCAACCACGGGTTGACCACC 692811
Query 244100 TGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTC 244159
|| |||||||| | ||||| ||||||||||||| |||| | || |||||| | || |
Sbjct 692812 TGGAACTCTCCAGCAAGCACACGGCGCTGGTAGATGTTGGAGGTGTACGGCTCAAAGCAC 692871
Query 244160 TCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTG 244219
|| ||||||| || ||||||| || || ||||| |||||||| | || ||||||||||
Sbjct 692872 TCGTTGTTGCCAAGAATCTGCGAGGTACTGGCAGTGGGCATGGGAGCCAGCAGCAGACTG 692931
Query 244220 TTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAG---TCCCACATGCCC 244276
|| | || ||||| || ||| ||| ||| ||| | ||||| | ||
Sbjct 692932 TTGCGAACACCGTGAAGCTTGAT-------CTG--CTCCTTCAGGCTATCCCA---GTCC 692979
Query 244277 GAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGG 244336
||||||| | | |||| |||||||||||||||||| | |||| ||||||
Sbjct 692980 CAGAGGTCGGTGGGCTTGACATTCCACATGTCAAACTGCAGGATACCCTGAGAGACGGGA 693039
Query 244337 CTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGTCGAG 244395
|||||| ||||| | ||||| || || || ||| | || || | || | ||
Sbjct 693040 GAGCCCTCATAGGTGGAGTAGGTTCCCTCCTCCTTGGCGATCTCCACGGAGGCCGAC-AG 693098
Query 244396 GGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT 244455
|| |||| ||||||||||||||||||| || ||||| || || |||| | || |
Sbjct 693099 AGCAGCGTGGTAGATGGTCTCGAAGATCTGCTGGTTCAGCTCCCGAGCCTCGGCGGACTC 693158
Query 244456 GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGG 244515
||||| |||| || | ||| | || ||||| ||||| || || | ||||||||
Sbjct 693159 AAAGGGCATGCGCAGAGCGAGGAAAGCATCAGCCAGACCCTGAACACCAACACCGATGGG 693218
Query 244516 TCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCAC 244575
| ||| ||| ||||| | || |||||||||||||| |||| | || || |
Sbjct 693219 GCGGTGGCGCATGTTGCTGTTGCGAGCCTCGGGCACGGGGTAGTGGTTGACATCAATGAT 693278
Query 244576 CTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTC 244635
||| ||||||||| | || | ||| ||| |||| || |||||| ||| |
Sbjct 693279 GCGGTTCAGGTTGCGGACAACCACCATGGTGACCTCGTGCAGCTTCTCAAAGTCATACAC 693338
Query 244636 GTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTT 244695
| ||| | | | || | ||| | || || |||| | |||||||||
Sbjct 693339 GC------CCTTGTTG-TAGTCA-----ACATAGGCGGGCAGAGCGAGGGAGGCCAGGTT 693386
Query 244696 GCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCA 244755
||| || |||||||| || | | ||||| | ||||| ||||| ||||| ||
Sbjct 693387 GCACACAGCCACCTCATCGGGAGCGCAGTACTCAATGATCTCAGTGCACAGGTTGGAGCT 693446
Query 244756 CTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCAT 244815
||||| ||||||| || || ||| |||| ||| ||| ||||||||| |||||
Sbjct 693447 GCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTACAGCAT 693506
Query 244816 GAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTT 244875
|||||| ||||||||| ||| || |||||| | | ||| || | | ||||||
Sbjct 693507 GAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGAGCCTT 693566
Query 244876 GACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGG 244935
|| ||| ||||| | ||||| |||||||| ||||||||||||||||||
Sbjct 693567 GATGGTCTTGCGACCGCGACCCTCAGCCTCGTACTTCTCGTACAGGGCCTCGAACTCCTC 693626
Query 244936 GCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCC 244995
||| || ||| | || ||||||||| |||||||| ||| |||||||| ||
Sbjct 693627 GCCGTAGCAGTCGGCAAGACCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCGGCGTT 693686
Query 244996 GTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGT 245055
| || ||| | || ||||||||| || |||||||| || ||| |||| | || ||||
Sbjct 693687 CTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGAGCCAGGAACAAATCTCTGGC 693746
Query 245056 CCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTG 245115
| ||| ||| ||| |||||| | ||| |||| || || || || ||| ||||
Sbjct 693747 GCGGACCTCCTCCTTTCCATGGTTCTTGCGCAGATCCATGAACTCGAACACATCGGCGTG 693806
Query 245116 CCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCAT 245175
||| ||||| | |||| || | ||||||||| ||||||||||| |||||||| ||
Sbjct 693807 CCACGGCTCGAGATAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCAACATA 693866
Query 245176 CCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGT 245235
| | || |||||| | || || | || | || || || || ||| |||||
Sbjct 693867 GCGCGCGGTGTTGTTGAACACTCGAAGCATGGGGATGATACCATTGGACGTGCCATTGGT 693926
Query 245236 GCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCGC 245291
|| || || | || | | | || | | | ||||||| || | ||||
Sbjct 693927 TCCGGCAATATAAGAACCAGTAGCAC---GGATAC-GGTGGACATTGAGACCAATGCCGC 693982
Query 245292 CGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGT 245351
| || ||||||||| | ||||||| |||||| |||||| || ||||| |||||||
Sbjct 693983 CAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGT 694042
Query 245352 CCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGA 245411
| ||| || | | ||| ||||| || || ||||||| || ||| | | | |||||
Sbjct 694043 CATCCTTTATATCAACCAGGAAGCACGACGAGAGCTGGGCCTGCGGGGTACCAGCGTTGA 694102
Query 245412 ACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGA-GC 245470
| || |||||| ||| ||||| ||| | ||| || | || ||| |||| | |
Sbjct 694103 AGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGACATCAAGTTGTAGGTCTCAATGA 694162
Query 245471 AGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTGGGGC 245530
| || |||| |||||| || ||| | || | ||||| ||||||||||
Sbjct 694163 CGCGC-TCGACGTTGTCTCCCCAGATGCCAACAGCAACACGCATGATCATGTGCTGGGGG 694221
Query 245531 GTCTCG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAAC 245587
|||| || || || | |||||||| ||| || ||||| || ||||||||
Sbjct 694222 CGCTCGACAATCTTGCCGTCAAG---CTTGAGCAGGTAAGACCGCTCCAGGGTCTTGAAG 694278
Query 245588 CCAAAGTACGAGTAGCCAAAGTC 245610
||||||||| |||| |||||
Sbjct 694279 CCAAAGTACTGGTAGTTGAAGTC 694301
>seq58
Length=769140
Score = 432 bits (478), Expect = 7e-116
Identities = 618/860 (72%), Gaps = 28/860 (3%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||| ||||||||||| ||||||
Sbjct 627644 ATCTGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACGGCCGAGGAGATCGACCTG 627703
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAA 42415
||||||| | | |||| | || | |||| || |||| || ||| ||
Sbjct 627704 TCCAAGGATATCCATGACTGGAACA-ACCGCCTGAACGATGACGAGCGTTTCTTCATCTC 627762
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| || |||||||||||||| ||||||||||| ||||| |||||||||| | |
Sbjct 627763 GCACATTCTTGCCTTCTTCGCCGCGTCTGACGGCATTGTCAACGAGAACCTGGTCGAGCG 627822
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|||| ||||||||| |||||| ||||||||||||||||||||||| ||
Sbjct 627823 TTTCAGCGCCGAGGTGCAGGTGCCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGAT 627882
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592
|||||| | ||||| ||| ||| | ||||||| |||| |||||| ||| ||
Sbjct 627883 GGAGAACATCCACTCCGAGACCTACTCG---CTGCTCATTGACACCTACATCAAGGAGCC 627939
Query 42593 CGTCG-AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651
| ||| |||| || ||||| ||||| || || || ||||||||| |||||||
Sbjct 627940 C-TCGCAGCGCTCGTTCCTCTTCAACGCCATTGACACCATCCCCTGCATCCGCAAGAAGG 627998
Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAG 42711
| |||||||| || ||||||| || || | | | |||| || | ||||| |
Sbjct 627999 CCGACTGGGCCATCCGCTGGATCCAGGACAAGGAGTCGTCCTACGGCCAGCGCCTGGTTG 628058
Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771
||||| ||||||||||||||||||||||| || |||||| | || ||||||||| |||
Sbjct 628059 CCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCTCGTCGATCTTCTGGGTCA 628118
Query 42772 AGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831
|| || | ||||||||| || |||||||| ||||| || ||| | |||||||
Sbjct 628119 AGAAGCGCGGCATGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCGCGTGACGAGG 628178
Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGA 42891
| ||||| | ||||| |||||||| || ||||| |||||||| |||| ||| |
Sbjct 628179 GTCTGCACACCGACTTCGCCTGCCTGCTCTTCTC---CCACCTCAAGCACCGCCCCAGCA 628235
Query 42892 AGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGC 42951
|||| ||| | |||||||| || ||||||| |||||| |||||||| ||||
Sbjct 628236 AGGACGTCATCCAGAGAATCATCACCGATGCCGTGGCCATCGAGCAGGAGTTCATCACCG 628295
Query 42952 AGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGT 43011
|| | |||||| ||||| | ||||||||| | ||| ||| |||||||| |||
Sbjct 628296 AGGCTCTGCCCTGCGCCCTGCTGGGCATGAACGCCACCCTGATGAAGCAGTACATCGAGT 628355
Query 43012 ACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACAACACGC 43065
|||||||||| | |||| | | | | |||| || || | ||||| |
Sbjct 628356 TCGTCGCCGAC---CGCCTG---CTGGTCGCTCTCGGCAACGAGAAGGTGTACAAGGCCA 628409
Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125
| |||||| ||||| ||||||||||||||| ||| |||||||||||||| |||||||
Sbjct 628410 CCAACCCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGCAAGACCAACTTCTTCGAGA 628469
Query 43126 AGCGCGTCGCCGACTACCAG 43145
|||| || | ||||||||||
Sbjct 628470 AGCGTGTTGGCGACTACCAG 628489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337630036080
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