Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq60 237 2e-57
seq58 98.7 1e-15
>seq60
Length=1285956
Score = 237 bits (262), Expect = 2e-57
Identities = 942/1465 (64%), Gaps = 43/1465 (3%)
Strand=Plus/Plus
Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001
||||| |||| ||||| |||||||||||||| ||||| || | || || | ||| |
Sbjct 692842 TAGATGTTGGAGGTGTACGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTG 692901
Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061
|| ||||||||||| |||| || || ||||| || | ||| | | | || | |||
Sbjct 692902 GCAGTGGGCATGGGAGCCAGCAGCAGACTGTTGCGAACACCGTGAAGCTTGATCTGCTCC 692961
Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 114121
|| ||| |||||||| || | | | || | | |||||| |||||||| |||
Sbjct 692962 TTCAGGCTATCCCAGTCCCAGAGGTCGGTGGGCTTGACATTCCACATGTCAAACTGCAGG 693021
Query 114122 ATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAAT 114181
||||| || ||| | || || |||||| | || ||| | ||||| ||| || |
Sbjct 693022 ATACCCTGAGAGACGGGAGAGCCCTCATAGGTGGAGTAGGTTCCCTCCTCCTTGGCGATC 693081
Query 114182 TC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 114238
|| |||| || | || || ||||| || || ||||| || || | ||||
Sbjct 693082 TCCACGGAGGCCGAC---AGAGCAGCGTGGTAGATGGTCTCGAAGATCTGCTGGTTCAGC 693138
Query 114239 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGAGACC 114297
|| |||||| |||| ||||| | | || || | | || |||| || |||||
Sbjct 693139 TCCCGAGCCTCGGCGGACTCAAAGGGCATGCG-CAGAGCGAGGAAAGCATCAGCCAGACC 693197
Query 114298 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTC---CAC 114354
|| ||||| | || || ||||| || | ||| || || ||||| ||| |||
Sbjct 693198 CTGAACACCAACACCGATGGGGCGGTGGCGCATGTTGCTGTTGCGAGC---CTCGGGCAC 693254
Query 114355 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 114414
||| || || ||| || | | || || || | || ||| | |||| ||
Sbjct 693255 GGGGTAGTGGTTGACATCAATGATGCGGTTCAGGTTGCGGACAACCACCATGGTGACCTC 693314
Query 114415 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 114474
|| ||||| || | ||| | || | | | | ||||| || || ||||
Sbjct 693315 GTGCAGCTTCTCAAAGTCATACACGCCCTTGTTGTAGTCAACATAGGCGGGCAGAGCGAG 693374
Query 114475 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 114534
|| ||||| || ||||||| |||||| | | |||||| || || || || ||
Sbjct 693375 GGAGGCCAGGTTGCACACAGCCACCTCATCGGGAGCGCAGTACTCAATGATCTCAGTGCA 693434
Query 114535 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 114594
|| || || || |||||| |||| |||||| || || ||| |||||| ||
Sbjct 693435 CAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTC 693494
Query 114595 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA- 114653
|||||| |||||| | || | || ||||| || || | || ||| || || | ||| |
Sbjct 693495 CTTGTACAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCACAG 693554
Query 114654 CATCGGCGGCTGGCACAGTGGCGTTGG---CTCGCCCCTCCTCCTCGTACTTTGTGTAGA 114710
| || | | || | ||| ||| | || ||||| |||||||||| ||| |
Sbjct 693555 CTTCTGAGCCTTGA----TGGTCTTGCGACCGCGACCCTCAGCCTCGTACTTCTCGTACA 693610
Query 114711 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 114770
|||| || ||||| || || | || | || || || || | ||||| | |
Sbjct 693611 GGGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGACCGGGGCACTCGTTGGGGCACATCA 693670
Query 114771 GAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTG 114830
||| ||| | | || ||| ||||||||||||||||| || |||||||| |||||
Sbjct 693671 GAGTCCACTCGGCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGAGCCA 693730
Query 114831 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 114890
||| | ||| | ||| | || || | || || || |||| |||| || |
Sbjct 693731 GGAACAAATCTCTGGCGCGGACCTCCTCCTTTCCATGGTTCTTGCGCAGATCCATGAACT 693790
Query 114891 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTACGAC 114944
| | | ||| ||||||||||| || || || | || | | || ||| |
Sbjct 693791 CGAACACATCGGCGTGCCACGGCTCGAGATAGATGGCAAAGGCGCCGGGGCGCTT--GTT 693848
Query 114945 GACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATAC 115004
| ||| |||||| ||||| | ||| ||| || || || |||||||| || |||||||
Sbjct 693849 G-CCACCCTGGTCAACATAGCGCGCGGTGTTGTTGAACACTCGAAGCATGGGGATGATAC 693907
Query 115005 CATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGT 115064
||| || |||||| || || |||| ||| | | || | || | |||| |
Sbjct 693908 CATTGGACGTGCCATTGGTTCCGGCAATATAAGAACCAGTAGCACGGATACGGTGGACAT 693967
Query 115065 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 115124
| |||||| || || ||| ||| ||||| ||||| | |||| || | ||||
Sbjct 693968 TGAGACCAATGCCGCCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGA 694027
Query 115125 TCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT- 115183
| || || || |||| |||| | | | |||||||| ||| | || |||||
Sbjct 694028 TACCCTCAATGCTGTCATCCTTTATATCAACCAGGAAGCACGACGAGAGCTG-GGCCTGC 694086
Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCT 115241
|| |||||||||||||||||||| || | || ||| ||| | | |||| |||||||
Sbjct 694087 GGGGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGA--AGAACTTGCTGGACATCA 694144
Query 115242 TATCGTAGGTCTCCAAGACG-GCGGGA--ATGTCTTCCCCGTGAATACCGATCGAGACCC 115298
| ||||||||| | |||| || || ||||| ||| | || || | | || |
Sbjct 694145 AGTTGTAGGTCTCAATGACGCGCTCGACGTTGTCTCCCCAG---ATGCCAACAGCAACAC 694201
Query 115299 GCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCT 115358
|||| | ||||| ||||| || | | | || || ||| | | |||||| |
Sbjct 694202 GCATGATCATGTGCTGGGGGCGCTCGACAATCTTGCCGTCAAGCTTGAGCAGGTAAGACC 694261
Query 115359 TCTCCAAGGTCTTGAGACCAAAATA 115383
||||| |||||||| ||||| ||
Sbjct 694262 GCTCCAGGGTCTTGAAGCCAAAGTA 694286
>seq58
Length=769140
Score = 98.7 bits (108), Expect = 1e-15
Identities = 292/447 (65%), Gaps = 14/447 (3%)
Strand=Plus/Minus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| ||||| ||||||||||||||||| ||||| ||| ||| ||| ||||||||
Sbjct 628486 GTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAGATGTTCTCCAT 628427
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGAG 125871
|| ||||| ||||| | | || | | | |||| | | | | | ||
Sbjct 628426 GAAGTCAAAGGGGTTGGTGGCCTTGTACACCTTCTCGTTGCCGAGAGCGACC------AG 628373
Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931
|| || || | |||| |||| ||||||| |||| | |||||| || | ||
Sbjct 628372 CAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATCAGGGTGGCGTTCATGCCCAGCAG 628313
Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991
| || || || || || ||||||| ||| ||| || ||||||| || | |||
Sbjct 628312 GGCGCAGGGCAGAGCCTCGGTGATGAACTCCTGCTCGATGGCCACGGCATCGGTGATGAT 628253
Query 125992 GGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAA 126050
|| ||| |||| | || | | || | || |||||| ||| |
Sbjct 628252 TCTCTGGATGACGTCCTTGCTGGGGCGGT-GCTTGAGGTGGGAGAAGAGCAGGCAGGCGA 628194
Query 126051 ACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCA 126110
| || ||| |||||||||||||| ||||| || || || |||||| ||| || ||||
Sbjct 628193 AGTCGGTGTGCAGACCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCA 628134
Query 126111 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCT 126170
| | || |||||||| | |||||| |||| | || | ||| ||||||||| ||||
Sbjct 628133 TCATGCCGCGCTTCTTGACCCAGAAGATCGACGAGAAGGCACCGCTGAAGAAGATGCCCT 628074
Query 126171 CCACACACGCGAACGCAAAGAGACGCT 126197
| || || || |||| || ||||
Sbjct 628073 CGACGGCGGCAAAGGCAACCAGGCGCT 628047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597352606899640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |