Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq101 98.7 1e-15
>seq101
Length=737149
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071
||||||||||| || || ||||| || | ||||| || | || || |||||||| |||
Sbjct 590414 GTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCA 590355
Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 42130
||||| || || ||||||||||| | || | || |||||| ||| ||| | || | ||
Sbjct 590354 GCGAAAATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCC-TGAATCTTCGACTT 590296
Query 42131 GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190
| | | | || || |||||||| || | ||| || || || ||||| || ||
Sbjct 590295 CACGTTATCAATGGTATCCGAGGATTCCACTTCCAACGTAATCGTCTTTCCCGTCAGAGT 590236
Query 42191 CTTTACAAAGATTTGCAT 42208
||| || ||||| |||||
Sbjct 590235 CTTCACGAAGATCTGCAT 590218
Score = 87.8 bits (96), Expect = 2e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||||||||| || | ||||| || |||| || |||||||| ||||||||
Sbjct 589725 CTCCTTCTGAATATTGTAGTCGGAGAGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAA 589666
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTT 42124
|| || ||||| ||||| | || | || |||||||||| ||| ||
Sbjct 589665 GATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTT 589618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543211896908720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |