Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq60 302 4e-77
>seq60
Length=1285956
Score = 302 bits (334), Expect = 4e-77
Identities = 1089/1680 (65%), Gaps = 54/1680 (3%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||| || |||||| ||| ||||| |||||| | || |||
Sbjct 694295 AACTACCAGTACTTTGGCTTCAAGACCCTGGAGCGGTCTTACCTGCTCAAGCTTGACGGC 694236
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || |||||| || || || || | ||||| || || | || || || ||
Sbjct 694235 AAGATTGTCGAGCGCCCCCAGCACATGATCATGCGTGTTGCTGTTGGCATCTGGGGAGAC 694176
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|| | | || | | | | || ||| |||| | ||| |||
Sbjct 694175 AACGTCGAGCGCGTCATTGAGACCTACAACTTGATGTCCAGCAAGTTCTTCACCCATGCC 694116
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954
|||| ||||| |||||||| || |||||| | | ||| | || ||||| |||||| |
Sbjct 694115 TCCCCCACCCTCTTCAACGCTGGTACCCCGCAGGCCCAGCTCTCGTCGTGCTTCCTGGTT 694056
Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014
| |||| ||| ||| || || | |||| ||||||| ||| || | |||
Sbjct 694055 GATATAAAGGATGACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGCGCCATGATC 693996
Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCCT 94072
|| || || || || || || ||| ||||||| |||| ||||| | ||||| |
Sbjct 693995 TCCAAGATGGCTGGCGGCATTGGTCTCAATGTCCAC--CGTATCCGTGCTACTGGTTCTT 693938
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
| || ||| ||||||||||| ||||| || || |||| ||||| || || |||||||
Sbjct 693937 ATATTGCCGGAACCAATGGCACGTCCAATGGTATCATCCCCATGCTTCGAGTGTTCAACA 693878
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | |||||||| || ||||||||||| | | | || | || || ||||||
Sbjct 693877 ACACCGCGCGCTATGTTGACCAGGGTGGCAACAAGCGCCCCGGCGCCTTTGCCATCTATC 693818
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
||||||| |||||||| || ||| | ||||| || ||||| |||||||| || || |
Sbjct 693817 TCGAGCCGTGGCACGCCGATGTGTTCGAGTTCATGGATCTGCGCAAGAACCATGGAAAGG 693758
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| || | |||||||| | ||| ||||| ||| | || || || || ||||| |
Sbjct 693757 AGGAGGTCCGCGCCAGAGATTTGTTCCTGGCTCTGTGGATCCCTGATCTCTTCATGAAGC 693698
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| |||||||| ||| ||| |||| ||| | || ||||| || || ||||| || |||
Sbjct 693697 GTGTCGAGAAGAACGCCGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGTCTTGCCG 693638
Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCC 94431
|| | || | || || | | |||| | ||||| | |||| | || |
Sbjct 693637 ACTGCTACGGCGAGGAGTTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGTCGCGGTC 693578
Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491
| ||| || | ||| |||||||||| || ||| | || | ||| |||||
Sbjct 693577 -GCAAGACCATCAAGGCTCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACC 693519
Query 94492 GGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCT 94550
|| | |||| ||| ||| |||||| | |||| ||| |||| ||||||| || ||||
Sbjct 693518 GGCAACCCCTTCATGCTGTACAAGGACCACTGT-AACCGCAAGAGCAACCAGAAGAACCT 693460
Query 94551 CGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGA 94610
|| || ||||| || |||||||| ||||| | ||||| |||| || ||
Sbjct 693459 GGGTACCATTCGCAGCTCCAACCTGTGCACTGAGATCATTGAGTACTGCGCTCCCGATGA 693400
Query 94611 GATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACAC 94670
| | |||||||| ||||||| |||| || ||| || | | || || |||||
Sbjct 693399 GGTGGCTGTGTGCAACCTGGCCTCCCTCGCTCTGCCCGCCTATGT------TGACTACA- 693347
Query 94671 GTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGT-CTTG- 94728
| | || | || || | ||| ||| || | || || | ||||| |||
Sbjct 693346 -ACAAGGGCGT-GTATGACTTTGAGAAGC---TGCA---CGAGGTCACCATGGTGGTTGT 693295
Query 94729 ----AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTC 94784
||||||||| | | || || ||| ||||||||| || ||||| |||
Sbjct 693294 CCGCAACCTGAACCGCATCATTGATGTCAACCACTACCCCGTGCCCGAGGCTCGCAACAG 693235
Query 94785 AAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGAT 94844
||| || || || |||||||| | || || |||||| | || || || | |
Sbjct 693234 CAACATGCGCCACCGCCCCATCGGTGTTGGTGTTCAGGGTCTGGCTGATGCTTTCCTCGC 693175
Query 94845 GATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAG 94904
|||| |||||| || || | ||| || || |||| | | || ||||| |
Sbjct 693174 TCTGCGCATGCCCTTTGAGTCCGCCGAGGCTCGGGAGCTGAACCAGCAGATCTTCGAGAC 693115
Query 94905 CATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGG---CC 94961
||| || ||| || || ||||| | | |||| ||| || ||| |
Sbjct 693114 CATCTACCACGCTGCTCTGTCGGCCTCCGTGGAGATCGCCA---AGGA-GGAGGGAACCT 693059
Query 94962 ACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGG 95021
|| | | | | || || ||| | ||||| || | ||||| ||| | |||
Sbjct 693058 ACTCCA--CCTATGAGGGCTCTCCCGTCTCTCAGGGTATCCTGCAGTTTGACATGTGGAA 693001
Query 95022 TGTGAAGCCCTCGGGTCTGTACGACTGGGA-AG-CTCTACGCGCTGATGTTATCAA---A 95076
||| |||||| | | || | |||||||| || || | | || | |||||
Sbjct 693000 TGTCAAGCCCACCGACCTCTGGGACTGGGATAGCCTGAAGGAGCAG-----ATCAAGCTT 692946
Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136
|||||||| ||| ||||| |||| ||||||||||| ||| || |||||||
Sbjct 692945 CACGGTGTTCGCAACAGTCTGCTGCTGGCTCCCATGCCCACTGCCAGTACCTCGCAGATT 692886
Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196
|||||||||||||||| || || || | |||||||||| | ||| | | || |||||
Sbjct 692885 CTTGGCAACAACGAGTGCTTTGAGCCGTACACCTCCAACATCTACCAGCGCCGTGTGCTT 692826
Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGT 95255
|| || || |||| || ||||| | | || || || || | || | || || |
Sbjct 692825 GCTGGAGAGTTCCAGGTGGTCAACCCGTGGTTGCTCCGCGATCTCGTCGAC-CTTGGCCT 692767
Query 95256 GTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACAT--C 95313
|||| ||| | | ||||||| | | || ||||||||| |||||||||| |
Sbjct 692766 GTGGTCGGACTCGATGAAGAACCGCATCATTGCCGACAACGGCTCGATCCAGAACATTGC 692707
Query 95314 CCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
| || || || | ||||||||||| || |||||||| || ||||| || | ||||||
Sbjct 692706 CAGC--ATCCCTGCTGACATCAAGGCTCTGTACAAGACGGTCTGGGAAATTTCCCAGCGC 692649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722377522680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |