Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq58 167 2e-36
seq101 84.2 2e-11
>seq58
Length=769140
Score = 167 bits (184), Expect = 2e-36
Identities = 314/455 (69%), Gaps = 20/455 (4%)
Strand=Plus/Plus
Query 52391 GGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGC 52450
|||| ||||| |||| ||||| ||| ||||||||| | || || ||| ||| |
Sbjct 628043 GGCC-AGCGCCTGGTTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCTC 628101
Query 52451 CGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTT 52510
| ||||| | | || | | ||||| |||||||||||||| ||| ||||||| |
Sbjct 628102 GTCGATCTTCTGGGTCAAGAAGCGCGGCATGATGCCCGGCCTGACCTTCTCCAACGAGCT 628161
Query 52511 GATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGAC 52564
||| ||||| ||||| || |||||||| ||||| || ||||| || | || |
Sbjct 628162 GATCTCGCGTGACGAGGGTCTGCACACCGACTTCGCCTGCCTGCTCTTCTCCCACCTCAA 628221
Query 52565 GCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGC 52624
|| | | || | || |||| |||| ||| || ||| || || |||||
Sbjct 628222 GCACC-GCCCCAGCAA--------GGACGTCATCCAGAGAATCATCACCGATGCCGTGGC 628272
Query 52625 TATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCA 52684
||||| ||||||| | || | || ||||| || ||||||||||||||||| ||
Sbjct 628273 CATCGAGCAGGAGTTCATCACCGAGGCTCTGCCCTGCGCCCTGCTGGGCATGAACGC-CA 628331
Query 52685 GTCC-ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGC 52743
| ||| ||||||||||||| || || || || ||| |||| ||||| || |
Sbjct 628332 CCCTGATGAAGCAGTACATCGAGTTCGTCGCCGACCGCCTGCTGGTCGCTCTCGG-CAAC 628390
Query 52744 CA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGC 52802
| ||| | ||| || ||| || ||||| || ||| | ||||| ||||| | |||
Sbjct 628391 GAGAAGGTGTACAAGGCCACCAACCCCTTTGACTTCATGGAGAACATCTCGCTGGGCGGC 628450
Query 52803 AAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||||||||||| ||||||||||| || ||||| ||
Sbjct 628451 AAGACCAACTTCTTCGAGAAGCGTGTTGGCGACTA 628485
>seq101
Length=737149
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| || || || |||||||| || || || |
Sbjct 590183 GACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCG 590124
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| || ||||| || || || || || || ||| || || |
Sbjct 590123 AAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTATCCTGGATCTTCGACTTCACG 590064
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||| || | |||||| ||||| | || | || || |||||||| || ||
Sbjct 590063 TTGTCGATGGTATCCGACGACTCGACCTCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTG 590004
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 590003 ACGAAAATCTGCAT 589990
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261574963760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |