Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq60 181 2e-40 >seq60 Length=1285956 Score = 181 bits (200), Expect = 2e-40 Identities = 339/493 (69%), Gaps = 4/493 (1%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897 |||||| || ||||||||||| |||| | | |||| | | | | || |||||||||| Sbjct 692454 CTTGTCAACAGTGAACTGAATAGGCG-CCGCAGCAGCCTGGGTACGGAGGTAGTACATGC 692512 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 ||||||| || || || ||| ||| | ||||||| | | |||| || ||| Sbjct 692513 CGGTCTTGAGACCAAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATCGTGG 692572 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGG 204017 |||| |||||| |||||||||||||| ||||| ||||||| | || || || | Sbjct 692573 GGTCCTTCATGTGGATGTTCAGAGACTGCGACTGGTCAATGAAAGCACCACGGTCGGCTG 692632 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077 |||| | | || || ||| ||||| ||||| ||||||||| ||| | || ||| Sbjct 692633 CCATCTGCACAACAGTGCGCTGGGAAATTTCCCAGACCGTCTTGTACAGAGCCTTGATGT 692692 Query 204078 GTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136 ||| | || | | || || |||||||||||||||||| || | | || || Sbjct 692693 CAGCAGGGA-TGCTGGCAATGTTCTGGATCGAGCCGTTGTCGGCAATGATGCGGTTCTTC 692751 Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196 || ||| ||||| ||| | || || || || | || ||||||| | | Sbjct 692752 ATCGAGTCCGACCACAGGCCAAGGTCGACGAGATCGCGGAGCAACCACGGGTTGACCACC 692811 Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCC 204256 || || ||||| | ||||| | || | | | |||| |||| | || || || | Sbjct 692812 TGGAACTCTCCAGCAAGCACACGGCGCTGGTAGATGTTGGAGGTGTACGGCTCAAAGCAC 692871 Query 204257 TCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAG 204316 ||||||||||| | |||||| | ||| ||||| ||||||||||||||||| ||||| | Sbjct 692872 TCGTTGTTGCCAAGAATCTGCGAGGTACTGGCAGTGGGCATGGGAGCCAGCAGCAGACTG 692931 Query 204317 TTGCGCACACCGT 204329 ||||| ||||||| Sbjct 692932 TTGCGAACACCGT 692944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153878054480