Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq60 181 2e-40
>seq60
Length=1285956
Score = 181 bits (200), Expect = 2e-40
Identities = 339/493 (69%), Gaps = 4/493 (1%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897
|||||| || ||||||||||| |||| | | |||| | | | | || ||||||||||
Sbjct 692454 CTTGTCAACAGTGAACTGAATAGGCG-CCGCAGCAGCCTGGGTACGGAGGTAGTACATGC 692512
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
||||||| || || || ||| ||| | ||||||| | | |||| || |||
Sbjct 692513 CGGTCTTGAGACCAAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATCGTGG 692572
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGG 204017
|||| |||||| |||||||||||||| ||||| ||||||| | || || || |
Sbjct 692573 GGTCCTTCATGTGGATGTTCAGAGACTGCGACTGGTCAATGAAAGCACCACGGTCGGCTG 692632
Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT 204077
|||| | | || || ||| ||||| ||||| ||||||||| ||| | || |||
Sbjct 692633 CCATCTGCACAACAGTGCGCTGGGAAATTTCCCAGACCGTCTTGTACAGAGCCTTGATGT 692692
Query 204078 GTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136
||| | || | | || || |||||||||||||||||| || | | || ||
Sbjct 692693 CAGCAGGGA-TGCTGGCAATGTTCTGGATCGAGCCGTTGTCGGCAATGATGCGGTTCTTC 692751
Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196
|| ||| ||||| ||| | || || || || | || ||||||| | |
Sbjct 692752 ATCGAGTCCGACCACAGGCCAAGGTCGACGAGATCGCGGAGCAACCACGGGTTGACCACC 692811
Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCC 204256
|| || ||||| | ||||| | || | | | |||| |||| | || || || |
Sbjct 692812 TGGAACTCTCCAGCAAGCACACGGCGCTGGTAGATGTTGGAGGTGTACGGCTCAAAGCAC 692871
Query 204257 TCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAG 204316
||||||||||| | |||||| | ||| ||||| ||||||||||||||||| ||||| |
Sbjct 692872 TCGTTGTTGCCAAGAATCTGCGAGGTACTGGCAGTGGGCATGGGAGCCAGCAGCAGACTG 692931
Query 204317 TTGCGCACACCGT 204329
||||| |||||||
Sbjct 692932 TTGCGAACACCGT 692944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795153878054480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |