Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq52 352 4e-92
seq63 95.1 2e-14
>seq52
Length=911667
Score = 352 bits (390), Expect = 4e-92
Identities = 865/1308 (66%), Gaps = 29/1308 (2%)
Strand=Plus/Plus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||| || || || ||||| || || || | || ||| || ||||| || || ||
Sbjct 805213 TCATCCTCCTCCTTGTACTTCTCGGCCTCGTTGAGCATGCGCTCGATGTCCTCCTTGGAG 805272
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | ||||| || || || || |||||| | ||| || || | | |||| || |
Sbjct 805273 AGACGGCCCTTGTCGTTGGTGATGACAATCTTGTTGGACTTGCCGGTGCCCTTCTCGAGA 805332
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
||| || |||| ||||| || ||||||| |||||| | || | ||| || || |
Sbjct 805333 GCAGACACGTTCATGATACCGTTGGCATCAAGATCGAAGGTAACCTCAATCTGGGGAACA 805392
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | || |||| || || || || | || || | || | | |||| ||| |
Sbjct 805393 CCGCGGGGAGCGGGGGGGATGCCGGTAAGCTCGAACTTGCCCATCAGGTTGTTGTCCTTG 805452
Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868
| || || ||||| || || || | || ||| | || || || ||
Sbjct 805453 GTGCGCTGGCGCTCACCCTCGTAAACCTGGATGAGCACACCGGGCTGGTTGTCGGAGAAG 805512
Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928
|| ||||| | | ||||| | || || || || || | || || | | ||||
Sbjct 805513 GTCGAGAAAGTCTCGGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATGAGCTTGGTC 805572
Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988
|| |||||||| ||| |||| || || || || || | ||||| ||| | |||
Sbjct 805573 ATCATACCACCGGCAGTCTCGATACCGAGCGAGAGCGGGGCAACGTC---GAGCAGAAGG 805629
Query 6989 TCTTGAACAGATTCGTTCCCT-----------TCACCCGTTAAGATGGCGGCTTGGACCG 7037
| | ||||| | || || || | | |||||| || ||||| |
Sbjct 805630 -----ATCTCCTTCGTGCTCTGGTTGGAGGTATCGCCAGACAGGATGGCAGCCTGGACAG 805684
Query 7038 TCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAA 7097
|| ||||| || || |||||||||||||| || | || || | || || ||||| |
Sbjct 805685 CAGCGCCGTAGGCAACGGCCTCATCGGGGTTGATGCTCTTGTTGGGCTCCTTGCCGTTGA 805744
Query 7098 AATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157
| | ||| | || | || || || ||||| || || |||||||| || | ||||
Sbjct 805745 AGTGATCGCTGATCAGCTTCTGGATCTTGGGGATGCGGGTGGATCCACCAACGAGCACGA 805804
Query 7158 TTTCATTCACTTTCGATTTATCGATCTTTGAGTC--TC--GAAGTGTTTTTTCGACAGGT 7213
| || | ||| | || || |||||||| | || || || | | | |||| ||
Sbjct 805805 TCTCGTGCACCTGGGACTTGTCGATCTTGGCATCGGTCAGGACGCGGT----CGACGGGC 805860
Query 7214 TCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGAT 7273
| || ||||| | ||| || || || || ||||| || || ||||| ||
Sbjct 805861 TGGATGGTCGAGCGGAAGAGATCCTGGCAGAGCTCTTCGAAACGAGCGCGAGTAATCGAA 805920
Query 7274 GTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAA 7333
|| ||||| |||| || || || | ||||||||| || || | || || || | |||
Sbjct 805921 GTGTAGAAGTCAATACCCTCATACAGCGAATCAATCTCGATCGAGGTCTGAGCAGACGAC 805980
Query 7334 GATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTA 7393
|| | || ||||| || ||||| || || || || | ||| || || ||||| | |||
Sbjct 805981 GAAAGGGTACGCTTGGCACGCTCGCAAGCAGTGCGGAGACGGCGGAGAGCACGAGCGTTC 806040
Query 7394 CCGGAAATATCTTTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCT 7452
||| | ||| ||||| || || || || ||||| |||| |||||| | | || |
Sbjct 806041 GAGGACAGATCCTTCTTGTGCTTGCGCTTGAACTCGTTCAC-GAAGTGCTGGACCAGACG 806099
Query 7453 CGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGAT 7512
||||||||| |||||||||| || || || || ||||||| ||||| || |||||
Sbjct 806100 GTGATCGAAATCCTCACCACCCAGATGGGTGTCACCAGCGGTCGACTTGACCTCGAAGAT 806159
Query 7513 ACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572
||| | |||||| | | | ||| ||||| || |||||||| || || || || |||||
Sbjct 806160 ACCGTCCTCAATGGTAAGGAGCGATACATCGAAAGTACCACCGCCAAGATCGAAGATGAG 806219
Query 7573 TACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632
||||| ||| | || ||||||||||| || || || || || || || || ||
Sbjct 806220 AACGTTGCGCTCGCCCTCGACCTTCTTATCGAGGCCATAGGCAATGGCGGCAGCGGTAGG 806279
Query 7633 TTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTG 7692
|| || || ||||| ||| ||||||||| ||||| | ||||| || || || ||
Sbjct 806280 CTCGTTGATGATACGGAGAACGTTCAGGCCGGCAATGAGACCAGCATCCTTGGTGGCCTG 806339
Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752
|| || || ||||| ||||| || || || || ||||| |||| ||||| | | ||
Sbjct 806340 ACGCTGAGAGTCGTTGAAGTAAGCGGGCACGGTCACGACGGCGTTAGTGACGGTGGTTCC 806399
Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGC 7812
||| ||||| || ||| | || ||||||||| || ||||| || || ||||| ||||
Sbjct 806400 GAGGTACGACTCGGCGGTCTCACGCATTTTGGTCAGGACCATAGACGAGATCTCCTCAGG 806459
Query 7813 CGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860
| |||||| || || || || || || || |||||||| ||||| ||
Sbjct 806460 GGTAAACTGCTTGGTCTCGCCCTTGAACTCGACTTCAATGATGGGCTT 806507
>seq63
Length=759387
Score = 95.1 bits (104), Expect = 2e-14
Identities = 140/196 (71%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656
||| || |||||||| || | || || || || || || || | || ||| ||| |||
Sbjct 509307 CTTCTCCAGACCGTAGGCCAGGGCAGCGGCAGTGGGCTCGTTGACAACACGCAGAACGTT 509248
Query 7657 CAGGCCAGCAATAGTTGCCG-CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGG 7715
||||| ||||| | |||| |||| || || || || || ||||||||||| |||||||
Sbjct 509247 AAGGCCGGCAATT-TGGCCGGCATCCTTGGTGGCCTGACGCTGCGAATCGTTGAAGTAGG 509189
Query 7716 CCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTT 7775
| || || || ||||| |||| | |||| ||| ||||| | || ||| | || |
Sbjct 509188 CAGGAACGGTGACGACGGCGTTCTTGACGGGCTTGGACAGATAGGCCTCGGCGGTCTCCT 509129
Query 7776 TCATTTTGGTAAGAAC 7791
|||| ||| | || ||
Sbjct 509128 TCATCTTGTTCAGGAC 509113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635131744091720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |