Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq60 260 2e-64
seq58 91.5 2e-13
>seq60
Length=1285956
Score = 260 bits (288), Expect = 2e-64
Identities = 904/1395 (65%), Gaps = 33/1395 (2%)
Strand=Plus/Minus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATA---TTGATTC 111667
||| ||| ||||| ||||||| || || | || ||| |||||| || | | ||
Sbjct 694221 CCCCCAGCACATGATCATGCGTGTTGCTGTTGGCATC--TGGGGA-GACAACGTCGAGCG 694165
Query 111668 TGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCT 111727
|| | ||||| ||| || ||||||| | | |||| ||| || | || |||||
Sbjct 694164 CGTCATTGAGACCTACAACTTGATGTCCAGCAAGTTCTTCACCCATGCCTCCCCCACCCT 694105
Query 111728 CTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGA 111787
||||||||||||||| || |||| | || || ||||| ||| | |||||
Sbjct 694104 CTTCAACGCTGGTACCCCGCAGGCCCAGCTCTCGTCGTGCTTCCTGGTTGATATAAAGGA 694045
Query 111788 GGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGC 111847
|| || | || || || | ||| |||| || ||| ||||| ||| |||
Sbjct 694044 TGACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTCCAAGATGGC 693985
Query 111848 TGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTAC 111907
||| || || || | | |||| | || | || | ||| |||| || ||
Sbjct 693984 TGGCGGCATTGGTCTCAATGTCCACCGTATCCGTGCTACTGGTTCTTATATTGCCGGAAC 693925
Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967
||||| || ||||||| || || |||||||| || || ||| ||| ||||||||
Sbjct 693924 CAATGGCACGTCCAATGGTATCATCCCCATGCTTCGAGTGTTCAACAACACCGCGCGCTA 693865
Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021
||| |||| | ||| ||| | | || | | || ||||||| ||||| ||
Sbjct 693864 TGTTGACCAGGGTGGCAACAAGCGCCCC---GGCGCCTTTGCCATCTATCTCGAGCCGTG 693808
Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081
|||||| ||| | | |||||| | || |||| ||||| || | ||||||| ||
Sbjct 693807 GCACGCCGATGTGTTCGAGTTCATGGATCTGCGCAAGAACCATGGAAAGGAGGAGGTCCG 693748
Query 112082 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141
| | ||| | ||| ||||| ||||| || ||||||||||||||| | || ||| |
Sbjct 693747 CGCCAGAGATTTGTTCCTGGCTCTGTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAA 693688
Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201
|| | | | ||| |||| | || || || || |||||||| |||| | ||
Sbjct 693687 GAACGCCGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGTCTTGCCGACTGCTACGG 693628
Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACG 112259
|||||||| || ||||| ||| |||||||||| || ||| ||| || |||
Sbjct 693627 CGAGGAGTTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGTC--GCGGTCGCAAGACC 693570
Query 112260 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318
| | || | || | ||||| | || || ||| || |||| |||||||| || | ||
Sbjct 693569 AT-CAAGGCTCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAACCC 693511
Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378
| ||||| ||||| ||| |||||||| ||||| || || ||||| ||||| ||
Sbjct 693510 CTTCATGCTGTACAAGGACCACTGTAACCGCAAGAGCAACCAGAAGAACCTGGGTACCAT 693451
Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 112438
|| |||||||| || || || ||| | || | | |||||| ||||||
Sbjct 693450 TCGCAGCTCCAACCTGTGCACTGAGATCATTGAGTACTGCGCTCCCGATGAGGTGGCTGT 693391
Query 112439 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTT 112496
||| ||||| || || ||||||| ||| ||||| || | | | |||| | | | |
Sbjct 693390 GTGCAACCTGGCCTCCCTCGCTCTGCCCGCCTATGTTGA-CTACA-ACAAGGGCGTGTAT 693333
Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556
|| | ||| || || ||||| || || | || ||||| ||| | | |||
Sbjct 693332 GACTTTGAGAAGCTGCACGAGGTCACCATGGTGGTTGTCCGCAACCTGAACCGCATCATT 693273
Query 112557 GATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613
||| || |||||||| ||| ||||| || || ||| | ||||| ||
Sbjct 693272 GATGTCAACCACTACCCCGTGCCCGAG---GCTCGCAACAGCAACATGCGCCACCGCCCC 693216
Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGA 112672
|| ||| | ||||| || ||||| || |||| ||| | || || ||| | |||||
Sbjct 693215 ATCGGTGTTGGTGTTCAGGGTCTGGCTGATGCTTTCCTCGCTCTG-CGCATGCCCTTTGA 693157
Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732
|||| ||| || ||| | || || || || ||||| || || ||||| |||||
Sbjct 693156 GTCCGCCGAGGCTCGGGAGCTGAACCAGCAGATCTTCGAGACCATCTACCACGCTGCTCT 693097
Query 112733 TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792
||| |||| | || ||| || || | || |||| |||||| |||||
Sbjct 693096 GTCGGCCTCCGTGGAGATCGCCAAGGAGGAGGGAACCTACTCCACCTATGAGGGCTCTCC 693037
Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGA 112852
| || || || | || || ||||| |||||| | | || ||| | || ||
Sbjct 693036 CGTCTCTCAGGGTATCCTGCAGTTTGACATGTGGAATGTCAAGCCCACCGACCTCTGGGA 692977
Query 112853 CTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 112912
|||||| || ||||| | |||||| | ||| |||| |||||||| || ||||
Sbjct 692976 CTGGGATAGCCTGAAGGAGCAGATCAAGCTTCACGGTGTTCGCAACAGTCTGCTGCTGGC 692917
Query 112913 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 112972
|| ||||| || ||| ||| | || || | || || || || |||||||| || ||
Sbjct 692916 TCCCATGCCCACTGCCAGTACCTCGCAGATTCTTGGCAACAACGAGTGCTTTGAGCCGTA 692857
Query 112973 CACGACGAACATCTA 112987
||| | ||||||||
Sbjct 692856 CACCTCCAACATCTA 692842
>seq58
Length=769140
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 102181 AGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTA 102240
|||| || | || ||||| || ||||| ||||||||| ||| |||||| | |
Sbjct 628047 AGCGCCTGGTTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCTCGTCGA 628106
Query 102241 TTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCT 102300
| | ||| |||||||||| || | ||||| || || ||||||||||||||| ||||
Sbjct 628107 TCTTCTGGGTCAAGAAGCGCGGCATGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCT 628166
Query 102301 CTCGTGACGAGGGACTCCAC 102320
| ||||||||||| || |||
Sbjct 628167 CGCGTGACGAGGGTCTGCAC 628186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741368015760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |