Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq60 259 6e-64
>seq60
Length=1285956
Score = 259 bits (286), Expect = 6e-64
Identities = 1139/1786 (64%), Gaps = 49/1786 (3%)
Strand=Plus/Plus
Query 105551 TCAAGACTGAACTGAATTGGGCGCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGGTC 105610
|||| | |||||||||| || ||| |||| | ||||| |||||||| ||||||
Sbjct 692458 TCAACAGTGAACTGAATAGGCGCCGCAGCAGCCTGGGTACGGAGGTAGTACATGCCGGTC 692517
Query 105611 TTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTT 105670
||||| || | ||||| || | ||||| | || |||| |||||| ||
Sbjct 692518 TTGAGACCAAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATCGTGGGGTCC 692577
Query 105671 TCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATA 105730
| |||| | |||| | || |||||||||||| |||||| | || |||||
Sbjct 692578 TTCATGTGGATGTTCAGAGACTGCGACTGGTCAATGAAAGCACCACGGTCGGCTGCCATC 692637
Query 105731 TCAATGACATCCTTCATCTTG---ATTTCCCACACTGTGCGGTAGAGATTCTTGATATCA 105787
| | ||| | || | |||||||| || || ||| ||| |||||| |||
Sbjct 692638 TGCACAACAG---TGCGCTGGGAAATTTCCCAGACCGTCTTGTACAGAGCCTTGATGTCA 692694
Query 105788 TCTGGGATATCTGAGATATTTTGAATTGAACCCC---CCGCCTTGACCATGAGATCCTTC 105844
| ||||| | || || || || || || | || ||| || | | ||||
Sbjct 692695 GCAGGGATGCTGGCAATGTTCTGGATCGAGCCGTTGTCGGCAATGA---TGCGGTTCTTC 692751
Query 105845 ATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATC 105904
|| | ||||| || |||| | |||||| || | | |||||| | |
Sbjct 692752 ATCGAGTCCGACCACAGGCCAAGGTCGACGAGATCGCGGAGCAACCACGGGTTGACCACC 692811
Query 105905 ACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964
|||||||| || || | | | | |||||||| | ||||| || ||||||||
Sbjct 692812 TGGAACTCTCCAGCAAGCACACGGCGCTGGTAGATGTTGGAGGTGTACGGCTCAAAGCAC 692871
Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024
|| || || || | || || | ||| ||| || ||||| || |||| || ||||||
Sbjct 692872 TCGTTGTTGCCAAGAATCTGCGAGGTACTGGCAGTGGGCATGGGAGCCAGCAGCAGACTG 692931
Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGA-GCTT 106083
|| |||| ||| | |||||| | ||||| || ||||||||| || | | |
Sbjct 692932 TTGCGAACACCGTGAAGCTTGATCTGCTCCTTCAGGCTATCCCAGTCCCAGAGGTCGGTG 692991
Query 106084 GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAA 106143
|| || || |||| |||| ||||| || || | || || || |||||| |||||| |
Sbjct 692992 GGCTTGACATTCC-ACATGTCAAACTGCAGGATACCCTGAGAGACGGGAGAGCCCTCATA 693050
Query 106144 TGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATA 106203
|| |||| || | | | || | || | ||| ||| | ||||| ||
Sbjct 693051 GGTGGAGTAGGTTCCCTCCTCCTTGGCGATCTCCACGGAGGCCGACAGAGCAGCGTGGTA 693110
Query 106204 CATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAA-----TGCG 106258
||||| || ||||| | |||| |||| || || | || ||||| ||||
Sbjct 693111 GATGGTCTCGAAGATCTGCTGGTTCAGCTCCCGAGCCTCGGCGGACTCAAAGGGCATGCG 693170
Query 106259 TAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGT 106318
|| | | ||| |||| || ||||| |||||||| | ||| || || | |||
Sbjct 693171 CAGAGCGAGGAAAG-----CATCAGCCAGACCCTGAACACCAACACCGATGGGGCGGTGG 693225
Query 106319 CGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGG 106375
||||| || || | ||| || ||| ||||| || || ||||||| |||
Sbjct 693226 CGCATGTTG--CTGTTGCG-AGCCTCGGGCACGGGGTAGTGGTTGACATCAATGATGCGG 693282
Query 106376 TTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGA 106435
|| || || | ||| | | | |||| || || || || ||| | ||| | ||
Sbjct 693283 TTCAGGTTGCGGACAACCACCATGGTGACCTCGTGCAGCTTCTCAAAGTCATACACGCCC 693342
Query 106436 GTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCA 106495
| | | | ||||| || || |||| || |||| ||||| |||||| ||||
Sbjct 693343 TTGTTGTAGTCAACATAGGCGGGCAGAGCGAGGGAGGCCAGGTTGCACACAGCCACCTCA 693402
Query 106496 TCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAA 106555
|| | | |||||| | || || || |||| |||||| || ||| || ||||
Sbjct 693403 TCGGGAGCGCAGTACTCAATGATCTCAGTGCACAGGTTGGAGCTGCGAATGGTACCCAGG 693462
Query 106556 TTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTC 106615
||||| ||||| ||||| ||| || |||||||| |||||| |||| | || |||
Sbjct 693463 TTCTTCTGGTTGCTCTTGCGGTTACAGTGGTCCTTGTACAGCATGAAGGGGTTGCCGGTC 693522
Query 106616 TCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGG- 106673
|| ||||| | || ||| || || | ||||| | || | | || | |||| |||
Sbjct 693523 TCGGTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGAGCCTTG----ATGGTCTTGCG 693578
Query 106674 --CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTC 106731
| || ||||| ||||||||||| ||| ||||| || |||||||| || |||
Sbjct 693579 ACCGCGACCCTCAGCCTCGTACTTCTCGTACAGGGCCTCGAACTCCTCGCCGTAGCAGTC 693638
Query 106732 GGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCG 106791
|| ||||| || || || || || | |||| ||| | | || ||| || ||
Sbjct 693639 GGCAAGACCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCGGCGTTCTTCTCGACACG 693698
Query 106792 CTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTC 106851
||||||||| || || || |||||||| | || | |||||| || |||| ||
Sbjct 693699 CTTCATGAAGAGATCAGGGATCCACAGAGCCAGGAACAAATCTCTGGCGCGGACCTCCTC 693758
Query 106852 GTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAG 106911
| || ||||| || | || | |||||| | | ||| |||||||| ||||| ||
Sbjct 693759 CTTTCCATGGTTCTTGCGCAGATCCATGAACTCGAACACATCGGCGTGCCACGGCTCGAG 693818
Query 106912 ATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGG 106967
||||| || | | || | | | | ||| | || | ||||||||||| |||
Sbjct 693819 ATAGATGGCAAAGGCGCCGGGGCGCTTGTTG-CCACCCTGGTCAACATAGCGCGCGGTGT 693877
Query 106968 CGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATAC 107027
||| || || |||||||| || || ||||||| || ||||| || || ||||
Sbjct 693878 TGTTGAACACTCGAAGCATGGGGATGATACCATTGGACGTGCCATTGGTTCCGGCAATAT 693937
Query 107028 GAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGA 107087
||| | | || | | | |||| | | ||||| || |||||| ||| ||||
Sbjct 693938 AAGAACCAGTAGCACGGATACGGTGGACATTGAGACCAATGCCGCCAGCCATCTTGGAGA 693997
Query 107088 TTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGA 107147
| || || | | || || |||||||||| | || ||| ||||| | | |
Sbjct 693998 TCATGGCGCAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTTATATCAA 694057
Query 107148 TAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTT 107206
|||||||| || | ||| || || || |||||||| ||||||||||| || |
Sbjct 694058 CCAGGAAGCACGACGAGAGCTG-GGCCTGCGGGGTACCAGCGTTGAAGAGGGTGGGGGAG 694116
Query 107207 GCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGT 107264
|| || ||| | | |||| ||||||| || ||| ||||| | ||| || | ||
Sbjct 694117 GCATGGGTGA--AGAACTTGCTGGACATCAAGTTGTAGGTCTCAATGACGCGCTCGACGT 694174
Query 107265 CTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310
|| || |||||| | || |||||||| | ||||| |||||
Sbjct 694175 TGTCTCCCCAGATGCCAACAGCAACACGCATGATCATGTGCTGGGG 694220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979819156920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |