Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq101 89.7 4e-13
seq94 89.7 4e-13
>seq101
Length=737149
Score = 89.7 bits (98), Expect = 4e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
||||| | || || | || | ||| || ||| ||| || ||||||||||| || ||
Sbjct 589760 CCGCCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGAATATTGTAGTCGGAG 589701
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
||| | || |||| || | |||||| || || || ||||| |||||||| |||| |||
Sbjct 589700 AGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGG 589641
Query 48660 ACGCCCTCCTTGTC 48673
| ||||||||||||
Sbjct 589640 ATGCCCTCCTTGTC 589627
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| || | ||| || | |||||| || || ||| ||| || || || ||||| || ||
Sbjct 590216 CCACCACGTAGGCGGAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAC 590157
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | || | || || | |||||| || || || || || ||||| ||||||| |||
Sbjct 590156 AGGGTGCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGGGGG 590097
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| ||||||||| || ||||| || || | | | || |||| ||| |||
Sbjct 590096 ATGCCCTCCTTATCCTGGATCTTCGACTTCACGTTGTCGATGGTATCCGACGACTCGACC 590037
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| || || || || || |||| || || || |||||||||||
Sbjct 590036 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 589990
>seq94
Length=69539
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48579 TTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATC 48638
|| || || ||||| || || || | || | || || | |||||| || ||||| |||
Sbjct 45452 TTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATC 45511
Query 48639 AGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCC 48698
|| |||||||| |||| ||| | |||||||||||| ||||| || ||| |
Sbjct 45512 AGGCGCTGTTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 45571
Query 48699 ACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAA 48758
| || || || | ||||||||| | || || || || ||||| | || || || |||
Sbjct 45572 ATAGTATCCGAGGACTCCACCTCAAGGGTGATAGTCTTGCCCGTAAGGGTCTTCACGAAA 45631
Query 48759 ATCTGCATCGTG 48770
|||||||| |||
Sbjct 45632 ATCTGCATAGTG 45643
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380936982523959
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |