Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq60 439 5e-118
seq58 260 3e-64
>seq60
Length=1285956
Score = 439 bits (486), Expect = 5e-118
Identities = 1028/1520 (68%), Gaps = 57/1520 (4%)
Strand=Plus/Plus
Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966
|||||||| | |||||| || || | ||||| | | |||||| | ||| || |||||
Sbjct 692800 GGGTTGACCACCTGGAACTCTCCAGCAAGCACACGGCGCTGGTAGATGTTGGAGGTGTAC 692859
Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026
||||| | || ||||||||| || |||||||| | || ||||| |||||||||||||||
Sbjct 692860 GGCTCAAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTGGCAGTGGGCATGGGAGCC 692919
Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCG--AAGCTCTGCCCAGT 213084
| ||| |||||||| | || ||||| ||| | | || | ||| | ||||||
Sbjct 692920 AGCAGCAGACTGTTGCGAACACCGTGAAGCTTGATCTG-CTCCTTCAGGCTAT-CCCAGT 692977
Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144
|||| ||||| | ||| || ||||||||||||||||||| ||| || |
Sbjct 692978 CCCAG---------AGGTCGGTGGGCTTGACATTCCACATGTCAAACTGCAGGATACCCT 693028
Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204
||||| ||||| || | |||||||| || | ||||||||| | ||| ||
Sbjct 693029 GAGAGACGGGAGAGCCCTCATAGGTGGAGTAGGTTCCCTCCTCCTTGGCGATCTCCACGG 693088
Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264
| ||| ||| ||||||| ||||||||| || || |||| | ||| |||| | ||||
Sbjct 693089 AGGCCGACAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGCTGGTTCAGCTCCCGAGCCT 693148
Query 213265 CTGGGGACGTGAAGGGCATCATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323
| | |||| |||||||| || ||| |||| |||||||||| ||||| || ||
Sbjct 693149 CGGCGGACTCAAAGGGCATGCGCAGAGCGA-GGAAAGCATCAGCCAGACCCTGAACACCA 693207
Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTT 213382
| |||||||| | ||| | || ||| ||| |||| ||| || |||||| |||
Sbjct 693208 ACACCGATGGGGCGGTGGCGCATGTTGCTGTTGCGAGC-CTCGGGCACGGGGTAGTGGTT 693266
Query 213383 GCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTC 213442
| || ||||| ||| ||||||||| |||| ||||||| | | ||| | |||
Sbjct 693267 GACATCAATGATGCGGTTCAGGTTGCGGACAACCACCATGGTGACCTCGTGCAGCTTCTC 693326
Query 213443 ---GTGATTGAACACGTAGCCCCCGTCCTGCACAAACT---CAGGCAGGGCGATGCTGGC 213496
|| || ||||| ||| || | ||| | | ||||| |||| | |||
Sbjct 693327 AAAGTCAT---ACACG---CCCTTGTTGTAGTCAACATAGGCGGGCAGAGCGAGGGAGGC 693380
Query 213497 CAGGTTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGT 213555
||||||||| || |||||||| | | ||| | |||||| |||||||| ||||||||||
Sbjct 693381 CAGGTTGCACACAGCCACCTCATCGGGAG-CGCAGTACTCAATGATCTCAGTGCACAGGT 693439
Query 213556 TGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCCTTG 213614
|| || || ||||| |||||||||| ||||| ||| ||| | ||| ||||||
Sbjct 693440 TGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTT-GCGGTTACAGTGGTCCTTG 693498
Query 213615 TAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGT 213672
|| |||||| ||||| |||||||| ||| | | | || || ||| ||| || |
Sbjct 693499 TACAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGAT--GGCATACCACAGCT 693556
Query 213673 ACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCT 213732
| ||||||| | | ||| || | | ||||||||||| ||||| ||
Sbjct 693557 TCTGAGCCTTGATGGTCTTGC-GACCGCGACCCTC--AGCCTCGTACTTCTCGTACAGGG 693613
Query 213733 CGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGC 213792
| | ||| || | ||| || | | || || || || ||| ||||| ||
Sbjct 693614 CCTCGAACTCCTCGCCGTAGCAGTCGGCAAGACCGGGGCACTCGTTGGGGCACATCAGAG 693673
Query 213793 TCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTG 213851
|||| || ||| | |||| ||| | || |||||| || || |||| |||||| || |
Sbjct 693674 TCCACTCGGCGTTCTTCTC-GACACGCTTCATGAAGAGATCAGGGATCCACAGAGCCAGG 693732
Query 213852 AACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCA 213911
|||| || |||| | ||| ||| |||| ||| ||||||||||| | || ||
Sbjct 693733 AACAAATCTCTGGCGCGGACCTCCTCCTTTCCATGGTTCTTGCGCAGATCCATGAACTCG 693792
Query 213912 AAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCG 213968
|| | || |||||||||||||| | ||||||||||||||||| | || | |||||
Sbjct 693793 AACACATCGGCGTGCCACGGCTCGAGATAGATGGCAAAGGCGCCGGGGCGCTTGTTGCCA 693852
Query 213969 CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG 214028
|||||||| || | || ||||||| | || || | ||| | | || |||
Sbjct 693853 CCCTGGTCAACATAGCGCGCGGTGTTGTTGAACACTCGAAGCATGGGGATGATACCATTG 693912
Query 214029 GACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC--TCAGGTTGCTCATGGAGA 214086
||| || |||||||| || ||||| || || | || | | | || ||| ||||
Sbjct 693913 GACGTGCCATTGGTTCCGGCAATATAAGAACCAGTAGCACGGATACGGTGGACATTGAGA 693972
Query 214087 GCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGC 214146
|| ||||| || || ||||||||||||||||||| | | | || || ||| |
Sbjct 693973 --CCAATGCCGCCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGATAC 694030
Query 214147 CGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GAC 214205
| | ||||||||||| | | | | || |||||| |||||||| ||||||| |
Sbjct 694031 CCTCAATGCTGTCATCCTTTATATCAACCAGGAAGCACGACGAGAGCT-GGGCCTGCGGG 694089
Query 214206 GAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTG 214265
| |||| |||||| || |||||| ||||||| | | |||||| | || | | ||
Sbjct 694090 GTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGACATCAAGTTG 694149
Query 214266 TAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGC 214325
|||||||| | ||| || || || ||| | ||| | ||| | |
Sbjct 694150 TAGGTCTCAATGACGCGCTCGACGTTGTCTCCCCAGATGCCAACAGCAACACGCATGATC 694209
Query 214326 ATGTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCC 214382
||||||||||| | ||| | || ||| | | |||||||||||| || ||||||
Sbjct 694210 ATGTGCTGGGGGCGCTCGA-CAATC--TTGCCGTCAAGCTTGAGCAGGTAAGACCGCTCC 694266
Query 214383 AGAGTCTTGAACCCAAAGTA 214402
|| |||||||| ||||||||
Sbjct 694267 AGGGTCTTGAAGCCAAAGTA 694286
>seq58
Length=769140
Score = 260 bits (288), Expect = 3e-64
Identities = 574/852 (67%), Gaps = 30/852 (4%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || ||| ||||||||||||
Sbjct 628489 CTGGTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAGATGTTCTC 628430
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTC-AGGCCCATCTGTTCCAGCA 47957
||||||| |||||||||| | || |||| || | || ||| | ||||||
Sbjct 628429 CATGAAGTCAAAGGGGTTGGTGGCCTTGTACA-CCTTCTCGTTGCCGAGAGCGACCAGCA 628371
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
|| | || |||||| |||||||||| | ||| |||||| ||||||||| | ||||
Sbjct 628370 GGCGGTCGGCGACGAACTCGATGTACTGCTTCATCAGGGTGGCGTTCATGCCCAGCAGGG 628311
Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077
||||| ||||| |||| ||||||| ||| || |||||| || | |
Sbjct 628310 CGCAGGGCAGAGCCTCGGTGATGAACTCCTGCTCGATGGCCACGGCATCGGTGA-----T 628256
Query 48078 GCTTAACGCGGGACTCTGA-GGGTTTGTTGCGCAGGTGCTT------GGCATAGAGCATG 48130
| || | | ||| ||| | ||| || | ||||||| || |||||| |
Sbjct 628255 GATT--CTCTGGA---TGACGTCCTTGCTGGGGCGGTGCTTGAGGTGGGAGAAGAGCAGG 628201
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
||||| ||||| |||||| || ||||| || ||| ||| ||||||||||| ||
Sbjct 628200 CAGGCGAAGTCGGTGTGCAGACCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGG 628141
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|| ||||| | || | || |||| |||||| || | || ||| | || |||||||
Sbjct 628140 CCGGGCATCATGCCGCGCTTCTTGACCCAGAAGATCGACGAGAAGGCACCGCTGAAGAAG 628081
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310
|||||||| || || || || || || | || ||| | || | | |||||| |
Sbjct 628080 ATGCCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGCCGTAGGACGACTCCTTGTCCTGG 628021
Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370
|||||| | |||||||| |||||||| |||||| || || || || ||||| |
Sbjct 628020 ATCCAGCGGATGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTGTCAATGGCGTTG 627961
Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTAC 48427
||||| | || || | ||| | ||||| | |||||||| | |||
Sbjct 627960 AAGAGGAACGAGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATGAGCAGC---GAGTAG 627904
Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487
|||| ||||| | ||||| || ||||||||| ||||||||| | ||||||| |
Sbjct 627903 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGGC 627844
Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547
|||||||| || | | ||| | ||| | ||| ||||| ||||| || || || || ||
Sbjct 627843 ACCTGCACCTCGGCGCTGAAACGCTCGACCAGGTTCTCGTTGACAATGCCGTCAGACGCG 627784
Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATT 48603
|| ||||||||||| | || | ||| ||||||| | | | || || ||
Sbjct 627783 GCGAAGAAGGCAAGAATGTGCGAGATGAAGAAACGCTCGTCATCGTTCAG-GCGGTTGTT 627725
Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663
|||| | || | || ||| |||||| | || || | |||||||| || || ||
Sbjct 627724 CCAGTCATGGATATCCTTGGACAGGTCGATCTCCTCGGCCGTCCAGAACGAGGCCTCAGC 627665
Query 48664 TTTTTTGTACAT 48675
|| ||||||||
Sbjct 627664 CTTCTTGTACAT 627653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931531251326720
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