Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq79 104 2e-16
seq94 91.5 1e-12
>seq79
Length=2610973
Score = 104 bits (114), Expect = 2e-16
Identities = 127/171 (74%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653
|| || |||| ||||| | | ||| ||||| ||||| ||||||||||||||||| |||
Sbjct 579487 TTGTAGTCAGACAGAGTCCGGCCATCCTCAAGCTGCTTGCCAGCAAAAATAAGACGCTGT 579428
Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCA 480713
|| || || ||||| || |||||||| || ||||| ||||| || || || ||
Sbjct 579427 TGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCC 579368
Query 480714 G-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAA 480763
| | | | |||||||| ||||| || |||||||||||||| |||||
Sbjct 579367 GAAGACTCCA-CCTCAAGGGTGATAGTCTTTCCGGTGAGAGTCTTGACGAA 579318
>seq94
Length=69539
Score = 91.5 bits (100), Expect = 1e-12
Identities = 112/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| ||||| ||||| ||||||||||| || || ||||| || || || || || |||||
Sbjct 45484 ATCCTCAAGCTGCTTGCCAGCAAAAATCAGGCGCTGTTGGTCCGGGGGGATGCCCTCCTT 45543
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
||| || ||||| |||||| || |||||||| | | |||||||| ||
Sbjct 45544 GTCCTGGATCTTCGACTTGACATTGTCGATAGTATCCGAGGACTCCACCTCAAGGGTGAT 45603
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| || || || || ||||| |||||||| ||
Sbjct 45604 AGTCTTGCCCGTAAGGGTCTTCACGAAAATCTG 45636
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268173494984684
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |