Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq47 125 6e-24
>seq47
Length=1202462
Score = 125 bits (138), Expect = 6e-24
Identities = 200/287 (70%), Gaps = 0/287 (0%)
Strand=Plus/Minus
Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377
|| ||||| ||||| | || | | |||| || |||||| |||||| ||||||||
Sbjct 618068 TCGGTCTCGGGGTTCTTGCACTTCTTGCACAGGACGAACTTGTTGATGAAGCCATCAAGA 618009
Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437
||||||| | ||| || ||||||| |||||||| ||| | || || | |
Sbjct 618008 TGGTCCTGGAGCTTGCTGGCATCGTGGGCGCCGTTGATGATCCAGCGGTCATCCGGAGGA 617949
Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497
|| | | || || ||||| |||||| | ||||||||||| | |||| | |||||
Sbjct 617948 TCAATGTTGGTCTGGGCGCCAAGCTCGAAGCCGAAGTACTTGATGACGTAAGAGCCCGGA 617889
Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557
|| | || | || || | | || |||||||| ||| ||||||||||||||||||
Sbjct 617888 CGGGCGAGGGACTGAGCAACGCTGCTCAGGTTGACGACGACGGTCTTGATGCCGTTGCCC 617829
Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAA 34604
|| || |||| ||||| ||||| ||| |||||||| |||||
Sbjct 617828 TTGCCCTCGATCTTGGTCTGGATGCTGTCCATCTTGTAGCGATAGAA 617782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412840930809569
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |