Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq47 125 6e-24 >seq47 Length=1202462 Score = 125 bits (138), Expect = 6e-24 Identities = 200/287 (70%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || ||||| ||||| | || | | |||| || |||||| |||||| |||||||| Sbjct 618068 TCGGTCTCGGGGTTCTTGCACTTCTTGCACAGGACGAACTTGTTGATGAAGCCATCAAGA 618009 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 ||||||| | ||| || ||||||| |||||||| ||| | || || | | Sbjct 618008 TGGTCCTGGAGCTTGCTGGCATCGTGGGCGCCGTTGATGATCCAGCGGTCATCCGGAGGA 617949 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497 || | | || || ||||| |||||| | ||||||||||| | |||| | ||||| Sbjct 617948 TCAATGTTGGTCTGGGCGCCAAGCTCGAAGCCGAAGTACTTGATGACGTAAGAGCCCGGA 617889 Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557 || | || | || || | | || |||||||| ||| |||||||||||||||||| Sbjct 617888 CGGGCGAGGGACTGAGCAACGCTGCTCAGGTTGACGACGACGGTCTTGATGCCGTTGCCC 617829 Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAA 34604 || || |||| ||||| ||||| ||| |||||||| ||||| Sbjct 617828 TTGCCCTCGATCTTGGTCTGGATGCTGTCCATCTTGTAGCGATAGAA 617782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840930809569