Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq58 163 4e-34
seq68 141 1e-27
seq46 123 4e-22
seq54 107 3e-17
seq123 102 1e-15
seq60 98.7 2e-14
seq56 98.7 2e-14
seq50 98.7 2e-14
>seq58
Length=769140
Score = 163 bits (180), Expect = 4e-34
Identities = 239/332 (72%), Gaps = 11/332 (3%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| || ||||| |||||| ||| ||||||||||| | |||||||||
Sbjct 628180 ACCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCATGCCGCGCTT 628121
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||||| ||| ||||| | |||| || ||| |||||||||||||||||||||||
Sbjct 628120 CTTGACCCAGAAGATCGACGAGAAGGCACCGCTGAAGAAGATGCCCTCGACGGCGGCAAA 628061
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTT---GATCCACTTCATCGC 794516
| | || || |||| ||| || | | | ||| |||| |||||| || ||
Sbjct 628060 GGCAACCAGGCGCT-GGCCGTAG-GACGA----CTCCTTGTCCTGGATCCAGCGGATGGC 628007
Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 794576
||| || ||||| || | | |||| | ||||| |||||| ||||||
Sbjct 628006 CCAGTCGGCCTTCTTGCGGATGCAGGGGATGGTGTCAATGGCGTTGAAGAGGAACGAGCG 627947
Query 794577 CT-CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635
|| ||| || ||||||| ||||||||| ||||| |||||||||||||| ||||||||||
Sbjct 627946 CTGCGAG-GGCTCCTTGATGTAGGTGTCAATGAGCAGCGAGTAGGTCTCGGAGTGGATGT 627888
Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667
| || || |||||||||||| || ||||||
Sbjct 627887 TCTCCATCATGATCTGGAAGCCGTAGAAGCAG 627856
Score = 149 bits (164), Expect = 1e-29
Identities = 183/250 (73%), Gaps = 0/250 (0%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || ||||| || ||| |||||| |||||||||||||| | |
Sbjct 628502 TGACACCAGCCTTCTGGTAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCA 628443
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
||||||| |||||| | || ||||||| | | ||| ||||||| ||||
Sbjct 628442 GCGAGATGTTCTCCATGAAGTCAAAGGGGTTGGTGGCCTTGTACACCTTCTCGTTGCCGA 628383
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | |||||||||||||||||||| || |||||||| ||| |||| ||||||||
Sbjct 628382 GAGCGACCAGCAGGCGGTCGGCGACGAACTCGATGTACTGCTTCATCAGGGTGGCGTTCA 628323
Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130
|||| | || || |||||| | |||| ||| ||||| | |||||| | ||||| |
Sbjct 628322 TGCCCAGCAGGGCGCAGGGCAGAGCCTCGGTGATGAACTCCTGCTCGATGGCCACGGCAT 628263
Query 794131 CGATGATGAT 794140
|| |||||||
Sbjct 628262 CGGTGATGAT 628253
>seq68
Length=963626
Score = 141 bits (156), Expect = 1e-27
Identities = 193/268 (72%), Gaps = 5/268 (2%)
Strand=Plus/Plus
Query 2019177 GCTTCG---AAAAGAA--TCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATG 2019231
|||||| ||||||| || ||| || || |||||||||||| ||||||| ||||| |
Sbjct 703155 GCTTCGCGCAAAAGAAAGTCACCCTACCACCGGGCCGCCACAAGCTGATCATTCTCGACG 703214
Query 2019232 AGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACA 2019291
| |||||| || | || || | ||||||||||| | ||| || ||||||| |||
Sbjct 703215 AAGCCGACAGCATGACCTCTGGCGCCCAGCAGGCTTTGCGACGCACAATGGAAATCTACT 703274
Query 2019292 CCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCC 2019351
| ||||| ||||| || ||| | || |||||| ||| | | ||||||| | ||||
Sbjct 703275 CGAACACCACGCGCTTCGCGTTTGCTTGCAACCAGTCCAACAAGATCATCGAGCCGCTCC 703334
Query 2019352 AGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTC 2019411
|| || ||||||||| |||| | |||| | |||||||| ||| ||| ||| |
Sbjct 703335 AGTCGCGGTGCGCCATCCTGCGGTACTCGCGGTTAACCGACGCGCAGGTCGTGAAGCGAC 703394
Query 2019412 TGCGCGAGATTATCGACGCCGAAAAGGT 2019439
||| |||| ||||| || || |||||
Sbjct 703395 TGCTGCAGATCATCGAGGCGGAGAAGGT 703422
>seq46
Length=1302616
Score = 123 bits (136), Expect = 4e-22
Identities = 337/511 (66%), Gaps = 33/511 (6%)
Strand=Plus/Minus
Query 653641 GCGCCAGCCCGAGGTGGGCGACAAACTGTCGTCGCGCCACGGGCAAAAGGGCACCGTGGG 653700
||| | ||| ||| |||||||||| | ||||||||||||||||| |||||| || ||
Sbjct 180363 GCGGCGGCCGGAGCTGGGCGACAAGTTCTCGTCGCGCCACGGGCAGAAGGGCGTGGTCGG 180304
Query 653701 CAGCGTGCGCTCGACC--GAGGAAATGCCGTGGTCGCCGCGCGGGGGCGCCACGCCCGAC 653758
|| | | |||||| ||||| |||||| || ||| | |||| |||||||
Sbjct 180303 CATCATTG--TCGACCAGGAGGACCTGCCGT--TCTCCGA-CTCGGGCATTGTGCCCGAC 180249
Query 653759 ATCGTCATCAACCCGCACGCCATCCCGTCGCGCATGACCATGGGCAAGATGATGGAGGCC 653818
||| |||| |||||||||| | |||||||||||||||| | |||||| |||| ||| |
Sbjct 180248 ATCATCATGAACCCGCACGGCTTCCCGTCGCGCATGACGGTCGGCAAGCTGATCGAGTGC 180189
Query 653819 CTCCTGGGCAAGG---------TGGCCTGCCGCGAGGGCTACG---TGGGCGACGGCACC 653866
|| ||||||| ||| | | ||| ||| ||||| | |||||||
Sbjct 180188 CTGACCGGCAAGGCGTCGGTGCTGGACGGGCGCAAGGACTACGGCTTTGGCGACG----- 180134
Query 653867 CCGTTTGGCGGCGTCACC--GTNNNNNNNNNNNNNNNNNAGTTGGCCCGCCACGGGTGCG 653924
|||| ||| |||| || | ||| ||||| | |
Sbjct 180133 -CGTT--CCGGTCGCACCCGGTCGAGGAGATGGGGCGGGTGCTGGTGGCGCACGGATTCT 180077
Query 653925 AGCGCTACGGCAAGGAGGTGCTCTACCACCCGCA-CACGGGCGAGCCCATGGAGGCGTTG 653983
| | |||||||| | || || | | | |||||||||||| |||||||||
Sbjct 180076 CTTGGGAGGGCAAGGA-CTACTTCACGTCGGGGATCACGGGCGAGCCGCTGGAGGCGTAC 180018
Query 653984 ATCTTTTCGGCGCCGGTCTACTACCAGGCCCTGCGCCACGTGGCCATCGACAAGATCCAC 654043
|||| | |||| ||||||||||| ||| ||| ||| |||||||| |||
Sbjct 180017 ATCTACAACGGGCCGATCTACTACCAGCGGCTGAAGCACATGGTGCAGGACAAGATGCAC 179958
Query 654044 GCCCGGCCGCGCGGCCCCGTGC-AGATGCTCACCAAGCAGCCGGTCGAGGGCCGGTCGCG 654102
| ||| || ||| |||| || || || || ||||||| ||||||||||||||
Sbjct 179957 TCGCGGTCG-ACGGGCCCGCGCGCGAGCCTGACGCGGCAGCCGACGGAGGGCCGGTCGCG 179899
Query 654103 CTCGGGCGGCTTTCGCCTCGGAGAGATGGAG 654133
| ||||||| | || || || |||||||||
Sbjct 179898 CGAGGGCGGCCTGCGGCTGGGCGAGATGGAG 179868
Score = 118 bits (130), Expect = 2e-20
Identities = 95/115 (83%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
||| ||||||| ||||| |||||||| ||||| ||| | || |||||||| || ||||||
Sbjct 1109851 GCCTCCAACTATCTCGATATCAAGCCACTCCTTGATGTTGGCTGCAAGACTGTTGCCAAC 1109910
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||||||||| || ||||| || || |||||||| ||||||| | |||
Sbjct 1109911 ATGATCAAGGGCAAGTCACCTGAGGAGATTCGTAAGACCTTCAACATCACGAACG 1109965
>seq54
Length=747515
Score = 107 bits (118), Expect = 3e-17
Identities = 105/133 (79%), Gaps = 2/133 (2%)
Strand=Plus/Plus
Query 2411517 CTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGC 2411576
||| |||||||| ||||||||||| ||||||||||||||| ||||||||| || |
Sbjct 411586 CTTCCGCTGGTCAACACCGCCAAACTGCACGTCGACGTCGAGGTACTGCTCGTCCAGCAC 411645
Query 2411577 CTGCATGAGCGGGTAGACGAGGTTGCTGAGCGGCGGGTTG-CGGTCCATCTTGACCACCT 2411635
||||| | || ||||| ||| ||||||||| | |||| |||| | |||||| ||||
Sbjct 411646 CTGCAGCACCGAGTAGAGCAGGCCGCTGAGCGGGGCGTTGTCGGT-CTGCTTGACGACCT 411704
Query 2411636 GGGCGGCGGCCTT 2411648
|||| |||||||
Sbjct 411705 CGGCGCCGGCCTT 411717
>seq123
Length=451977
Score = 102 bits (112), Expect = 1e-15
Identities = 300/455 (66%), Gaps = 12/455 (3%)
Strand=Plus/Minus
Query 2175039 GCGGCGGTGCGCACGGCATCGAGCGCCGTTGCCACGCTGCCGTCGGTGCCGTTTTTAAAC 2175098
|| |||| || | |||||||| || ||| | | |||||||||||||| || ||
Sbjct 265374 GCAGCGGCGCCAATGGCATCGATAGCAACACCCAGGTTACCGTCGGTGCCGTTCTTGAAG 265315
Query 2175099 CCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGTGCACCTGGCTCTCGGTGGTGCGC 2175158
||||| || || | ||| | || |||| || ||||| | |||| ||||||||||||
Sbjct 265314 CCGACAGGGAAAGACAGGCCAGAGGCCAGCTCACGGTGTAGCTGGGACTCGGTGGTGCGG 265255
Query 2175159 GCGCCCACGGCGCCCCACGCCACGAGGTCTGCCA--AATAGGGCGCCACCAAAGGGCTGA 2175216
|| || | |||||| || | || ||| || | || ||| | | | | ||
Sbjct 265254 GCACCGATGGCGCCGACCGAGATGAAGTCAGCGAGGAACTGGGGGGAG--ATGGTGTCGA 265197
Query 2175217 GAAACTCGACAGCCACGGGCTGGCCGACGTCGACGACCAGGTCGCGCAGCAGTCGACGCG 2175276
| | ||| || | |||| |||| | || |||||||| | || | | ||
Sbjct 265196 GCATTTCGCTGGCAATGGGCATGCCGCTGGCGGT---CAGGTCGCTGAAGAGCTGTCTCG 265140
Query 2175277 ATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTGGCCAGGC 2175336
| |||||| | | | | ||| || || ||||||||| || ||| |
Sbjct 265139 ACACACGGAGGCCCTTGTTGATCTTGAAGGACGAGTTGATATCGGGGTCGTTGATCAGAC 265080
Query 2175337 CCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACCAGGAGAG 2175396
||||||| |||||||| ||||| ||||| |||| |||||||||||||| | || ||
Sbjct 265079 CCTTCCAGCCGACGGTGGTGCGGGGCTTCTCGAGGTAGGCGCGCATGACAATCACTAGGT 265020
Query 2175397 CGTCGCCGACCTCTGTCTCGGCAAAGGTGC-GCAGCCGTCGGCCATACTCGACGATGGCC 2175455
||||| ||| ||| |||| || ||| || || | | ||||||||| | ||||
Sbjct 265019 CGTCG--GACAGCTG-GGCGGC-GAGCTGCTTTAGGCGACCGGCATACTCGAGGGCGGCC 264964
Query 2175456 TGGGGATCGTGCGCCGAACACGGACCGACGACCAC 2175490
| ||| ||||| || || || |||||||||||
Sbjct 264963 TCGGGGTCGTGGAGGGAGCAGGGGCCGACGACCAC 264929
>seq60
Length=1285956
Score = 98.7 bits (108), Expect = 2e-14
Identities = 176/254 (69%), Gaps = 5/254 (2%)
Strand=Plus/Plus
Query 2069991 GCCCTCATAGTAGGACGGATAGGGTCCCTCCTTTGCGGCCAGTTGTGCCGACGCCGTCGC 2070050
|||||||||| ||| |||| |||||||| ||| | | | || |||| |
Sbjct 693042 GCCCTCATAGGTGGAG---TAGGTTCCCTCCTCCTTGGCGATCTCCACGGAGGCCGACAG 693098
Query 2070051 CGCCGCATGGTAGATCGTCTCAAAGATGGTGC-GGTTGAGGCGACGCGCGCCGGCGCTCT 2070109
|| || |||||||| ||||| ||||| ||| |||| || || || ||||| ||
Sbjct 693099 AGCAGCGTGGTAGATGGTCTCGAAGATC-TGCTGGTTCAGCTCCCGAGCCTCGGCGGACT 693157
Query 2070110 CCCACGGCAGGTCCATCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCG 2070169
| | |||| | || | || || || ||||| ||||| || || || || || |
Sbjct 693158 CAAAGGGCATGCGCAGAGCGAGGAAAGCATCAGCCAGACCCTGAACACCAACACCGATGG 693217
Query 2070170 GCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCA 2070229
| |||||||||| ||| || || ||||||||||| ||||||||||||| || || |
Sbjct 693218 GGCGGTGGCGCATGTTGCTGTTGCGAGCCTCGGGCACGGGGTAGTGGTTGACATCAATGA 693277
Query 2070230 CGCGGTTGAGGTTG 2070243
|||||| ||||||
Sbjct 693278 TGCGGTTCAGGTTG 693291
>seq56
Length=737661
Score = 98.7 bits (108), Expect = 2e-14
Identities = 104/135 (77%), Gaps = 9/135 (7%)
Strand=Plus/Plus
Query 2175047 GCGCACGGCATCGA--GCGCCGTTG-CCACGCTG------CCGTCGGTGCCGTTTTTAAA 2175097
|||||| ||| ||| ||| || || |||||||| |||||||||||||| || ||
Sbjct 317086 GCGCACAGCACCGATGGCGTCGATGGCCACGCTGAGCGAGCCGTCGGTGCCGTTCTTGAA 317145
Query 2175098 CCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGTGCACCTGGCTCTCGGTGGTGCG 2175157
|| ||||| || ||| ||||||||| |||||||||| ||| ||||||||||||||
Sbjct 317146 GCCCACCGGGAAGCTGAGCCCCGACGCCAGCTCGCGGTGCAGCTGACTCTCGGTGGTGCG 317205
Query 2175158 CGCGCCCACGGCGCC 2175172
|| ||||| || ||
Sbjct 317206 AGCTCCCACAGCTCC 317220
>seq50
Length=145411
Score = 98.7 bits (108), Expect = 2e-14
Identities = 83/102 (81%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||| ||||| ||||| |||||||| || ||||||||| |||| ||||| ||| | |
Sbjct 27464 GTACTTAGTGACAGCCTTAGTACCCTCAGAAACGGCGTGCTTGGCAAGTTCACCGGGAAG 27405
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGT 1485572
||||||||| || | |||||||||||| || | || ||| ||
Sbjct 27404 GATCAGGCGAACAGAGGTCTGGATCTCTCGCGAGCTGATAGT 27363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916232252183387
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