Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq101 86.0 5e-12
>seq101
Length=737149
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || | || ||||| ||||| ||| |||| |||| |
Sbjct 589762 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCG 589821
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|||||| ||| | || || ||||| ||||| || ||| | || |||||||
Sbjct 589822 GATACTATCGATAACGTCAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCGGATCAG 589881
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || || | ||| || || ||||| ||||| | | || || | |||||||||
Sbjct 589882 CAGCGCCTAATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGTCTGACTACAAC 589941
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || || ||||| || ||||| |||||
Sbjct 589942 ATCCAGAAAGAGTCCACCCTGCACTTGGTG 589971
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| ||||| ||||| || | || ||||| ||||| || | || ||| |
Sbjct 589990 ATGCAGATTTTCGTCAAGACCCTGACTGGCAAGACCATCACTCTGGAGGTCGAGTCGTCG 590049
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | || || ||||| ||||| || ||| | ||| |||||||
Sbjct 590050 GATACCATCGACAACGTGAAGTCGAAGATCCAGGATAAGGAGGGCATCCCCCCGGATCAG 590109
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || || | || || || ||||| ||||| | | || || |||||||||||
Sbjct 590110 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGCACCCTGTCGGACTACAAC 590169
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||||| || ||||| |||||
Sbjct 590170 ATCCAGAAGGAGTCCACCCTGCACTTGGTG 590199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398876153445637
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |