Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq101 102 6e-17 >seq101 Length=737149 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| || || ||||| ||||| || ||||| || || | | |||||| Sbjct 589977 ACGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCC 589918 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || ||||||||| | || | | ||||||||||| ||||| ||||| || Sbjct 589917 ATCCTCAAGCTGCTTGCCAGCAAAGATTAGGCGCTGCTGATCCGGAGGAATGCCCTCCTT 589858 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 || || | || ||||| | || | ||| || || || || || || || || Sbjct 589857 ATCCTGGATCTTCGACTTGACGTTATCGATAGTATCCGACGACTCCACCTCGAGGGTGAT 589798 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || | ||| || || || |||||||| Sbjct 589797 GGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 589762 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || |||||||| || || ||||| || || || ||||| || |||| | |||||| | Sbjct 590204 CGGAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCA 590145 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || ||||| || || ||||| | || | | ||||||||||| || || ||||| || Sbjct 590144 TCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTA 590085 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | || || || | || | || || || || || || ||||| || Sbjct 590084 TCCTGGATCTTCGACTTCACGTTGTCGATGGTATCCGACGACTCGACCTCCAGAGTGATG 590025 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | ||| || || || |||||||| Sbjct 590024 GTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 589990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218575583753