Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq58 82.4 7e-11 >seq58 Length=769140 Score = 82.4 bits (90), Expect = 7e-11 Identities = 128/182 (70%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | ||| || ||| |||| | || ||||| ||||| |||| ||| Sbjct 627821 GCTCGACCAGGTTCTCGTTGACAATGCCGTCAGACGCGGCGAAGAAGGCAAGAATGTGCG 627762 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||||| || || | |||||||| ||||||||||| | | |||||||||| Sbjct 627761 AGATGAAGAAACGCTCGTCATCGTTCAGGCGGTTGTTCCAGTCATGGATATCCTTGGACA 627702 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 ||||||||| ||| || ||||| | | | |||||||||||| |||| |||| Sbjct 627701 GGTCGATCTCCTCGGCCGTCCAGAACGAGGCCTCAGCCTTCTTGTACATCTGCC--AGAT 627644 Query 110892 CT 110893 || Sbjct 627643 CT 627642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445093660030560