Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq53 93.3 5e-14 >seq53 Length=1555449 Score = 93.3 bits (102), Expect = 5e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965 ||||||| | |||| || || | ||||| || ||| || || ||||| |||| | Sbjct 193561 CCAGCTGGGTCTTCAAGGCATCGATGTGGTCGATGTACACATGGGCGTCGCCCATCACAT 193620 Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025 | | | || ||| | | || ||||||||| | ||||| || || || | || Sbjct 193621 GAGTGAGGGTTCCGGGCACCAAGTCGCACACGTGGGCAATCATGTGCGTCAGAAGGGCGT 193680 Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGC 147085 ||||||| |||||||| || || ||||| |||||||| | |||| |||||||||||||| Sbjct 193681 AGCTGGCAATGTTGAACGGCACACCCAGACCCATGTCGCAGGACCGCTGGTACAGCTGGC 193740 Query 147086 A 147086 | Sbjct 193741 A 193741 Score = 89.7 bits (98), Expect = 6e-13 Identities = 194/288 (67%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 ||||| |||||| | ||||||||||||||||||||||| | || || ||| Sbjct 193842 ACGTAGAACTGGGCAAACATGTGGCACGGCGGCAGCGCCATCTTCTTGATATCGGCCGGG 193901 Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC 147225 ||||| ||||||| | || || | | | ||||| | | || | ||| | Sbjct 193902 TTCCACGCCGAGAGGATCATGCGGCGGTCGTACGGGTTGGTGCGCAGCTTCTGGATGATT 193961 Query 147226 CACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACCTGGC 147284 | |||||| |||||||| || |||| || ||| ||| |||||| ||| Sbjct 193962 TCGGCGATCTGGTCGACGCCCTGTCCGGTATAGTCGGTTTTCGC-GTCGACGTACTCGGC 194020 Query 147285 CCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGA 147344 |||||||| | |||||||||||||||||| || |||| ||||||| | | ||| Sbjct 194021 ACCAAAGTGGCGCCACTGGAAGCCGTACACCGGGCCCAAGTCGCCGACTTCCCGGTGGCC 194080 Query 147345 GAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392 | ||| | | | ||| |||||| | || |||| | |||||||||| Sbjct 194081 CAGGCCGACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGAT 194128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487029951200