Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq53 93.3 5e-14
>seq53
Length=1555449
Score = 93.3 bits (102), Expect = 5e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965
||||||| | |||| || || | ||||| || ||| || || ||||| |||| |
Sbjct 193561 CCAGCTGGGTCTTCAAGGCATCGATGTGGTCGATGTACACATGGGCGTCGCCCATCACAT 193620
Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025
| | | || ||| | | || ||||||||| | ||||| || || || | ||
Sbjct 193621 GAGTGAGGGTTCCGGGCACCAAGTCGCACACGTGGGCAATCATGTGCGTCAGAAGGGCGT 193680
Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGC 147085
||||||| |||||||| || || ||||| |||||||| | |||| ||||||||||||||
Sbjct 193681 AGCTGGCAATGTTGAACGGCACACCCAGACCCATGTCGCAGGACCGCTGGTACAGCTGGC 193740
Query 147086 A 147086
|
Sbjct 193741 A 193741
Score = 89.7 bits (98), Expect = 6e-13
Identities = 194/288 (67%), Gaps = 2/288 (1%)
Strand=Plus/Plus
Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165
||||| |||||| | ||||||||||||||||||||||| | || || |||
Sbjct 193842 ACGTAGAACTGGGCAAACATGTGGCACGGCGGCAGCGCCATCTTCTTGATATCGGCCGGG 193901
Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC 147225
||||| ||||||| | || || | | | ||||| | | || | ||| |
Sbjct 193902 TTCCACGCCGAGAGGATCATGCGGCGGTCGTACGGGTTGGTGCGCAGCTTCTGGATGATT 193961
Query 147226 CACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC-CGCAGTCCACGTACCTGGC 147284
| |||||| |||||||| || |||| || ||| ||| |||||| |||
Sbjct 193962 TCGGCGATCTGGTCGACGCCCTGTCCGGTATAGTCGGTTTTCGC-GTCGACGTACTCGGC 194020
Query 147285 CCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGA 147344
|||||||| | |||||||||||||||||| || |||| ||||||| | | |||
Sbjct 194021 ACCAAAGTGGCGCCACTGGAAGCCGTACACCGGGCCCAAGTCGCCGACTTCCCGGTGGCC 194080
Query 147345 GAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392
| ||| | | | ||| |||||| | || |||| | ||||||||||
Sbjct 194081 CAGGCCGACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGAT 194128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487029951200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |