Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq101 95.1 1e-14
seq60 82.4 6e-11
>seq101
Length=737149
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || || || || || |||||||| || | |||| | || |||
Sbjct 590198 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTCG 590139
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || ||| | ||||||||||| |||||||| || | ||||| ||||| |
Sbjct 590138 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCCGGGGGGATGCCCTCCTTATCCTGG 590079
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| |||| | | || | || || | | || || || ||||| || | |||
Sbjct 590078 ATCTTCGACTTCACGTTGTCGATGGTATCCGACGACTCGACCTCCAGAGTGATGGTCTTG 590019
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| ||||| || || || || || ||||||
Sbjct 590018 CCAGTCAGGGTCTTGACGAAAATCTGCATA 589989
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116
|| || || || ||||||||| | |||| | || |||||||| || || ||| ||
Sbjct 590408 TCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAA 590349
Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176
|| || ||||| || ||||| || | ||||| ||||| ||||| |||| | |
Sbjct 590348 ATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGAATCTTCGACTTCACGTTA 590289
Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236
|| | || || | || ||| ||||| | || || | || ||||||||||| |||||
Sbjct 590288 TCAATGGTATCCGAGGATTCCACTTCCAACGTAATCGTCTTTCCCGTCAGAGTCTTCACG 590229
Query 27237 AAGATTTGCATA 27248
||||| ||||||
Sbjct 590228 AAGATCTGCATA 590217
>seq60
Length=1285956
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/231 (68%), Gaps = 3/231 (1%)
Strand=Plus/Plus
Query 130763 TGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGAT 130822
|| || || ||||| || || || | ||| |||||| ||| |||| |||||| |
Sbjct 692812 TGGAACTCTCCAGCAAGCACACGGCGCTGGTAGATGTTGGAGGTGTACGGCTCAAAGCAC 692871
Query 130823 TCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAA 130882
||||||||||| | || || | ||| | || ||||||||| |||| | |||
Sbjct 692872 TCGTTGTTGCCAAGAATCTGCGAGGTACTGGCAGTGGGCATGGGAGCCAGCAGCAGACTG 692931
Query 130883 TTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTA 130942
|| |||| |||||| | |||| | ||||| |||||| ||||| || |||
Sbjct 692932 TTGCGAACACCGTGAAGCTTGATCTGCTCCTTCAGGCTATCCCAGTCCCAGAGGTCGGTG 692991
Query 130943 GGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTTACTGGCGGGA 130993
|| |||||| |||||||| ||||| || || || || | | | |||||
Sbjct 692992 GGCTTGACA---TTCCACATGTCAAACTGCAGGATACCCTGAGAGACGGGA 693039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424933711207896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |