Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq58 105 2e-17 >seq58 Length=769140 Score = 105 bits (116), Expect = 2e-17 Identities = 369/554 (67%), Gaps = 29/554 (5%) Strand=Plus/Plus Query 443330 GGCCCAGTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGA 443389 |||| ||| ||||| |||||||| || || |||||||| | || |||||| | Sbjct 627670 GGCCTCGTTCTGGACGGCCGAGGAGATCGACCTGTCCAAGGATATCCATGACTGGAACAA 627729 Query 443390 ACGACTATCTAGCCATGAAC-GCGATTTCTTCAAAT-GCA---TCTTGGCCTTCTTTGCA 443444 || || | | |||| ||| |||||||| | ||| ||||| ||||||| || Sbjct 627730 CCGCCTG---AACGATGACGAGCG-TTTCTTCATCTCGCACATTCTTG-CCTTCTTCGCC 627784 Query 443445 CCGAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGT--AGTGT 443502 || ||||| || ||| ||||| ||||| ||||||| || ||| || || Sbjct 627785 GCGTCTGACGGCATTGTCAACGAGAACCTGGTCGAGCGTTTCAGCGCCGAGGTGCAG-GT 627843 Query 443503 ACACCGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGG 443562 | | |||||||||| |||||||| ||||| | ||||||||||| ||| ||||| Sbjct 627844 GC-CTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGA 627902 Query 443563 TCTACAGTCAGTTGATCAA-GACAC-TAATTCCGAACGAAGACGAACAGCGGTCCATCTT 443620 |||| || | || ||| ||||| || || || || | ||||| || || | Sbjct 627903 CCTAC--TC-GCTGCTCATTGACACCTACATC--AAGGAGCCCTCGCAGCGCTCGTTCCT 627957 Query 443621 CT-CATCGTTCATGAC--CACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTG 443677 || || || |||| || || ||||| | ||| | |||||| | | || Sbjct 627958 CTTCAACGCCATTGACACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCCATCCGCTG 628017 Query 443678 GCTCGA--ACGAGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAA 443735 | || | || || | || || || | |||| || || || ||||| | ||||| Sbjct 628018 GATCCAGGACAAGGAGTCGTC--CTACGGCCAGCGCCTGGTTGCCTTTGCCGCCGTCGAG 628075 Query 443736 GGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTAT 443795 || | || || ||||| || || | || ||||||||| | || ||||| || | || Sbjct 628076 GGCATCTTCTTCAGCGGT-GCCTTCTCGTCGATCTTCTGGGTCAAGAAGCGCGGCATGAT 628134 Query 443796 GCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTT 443855 || ||| |||||||| ||||| |||||| || ||||||||| |||| |||||| Sbjct 628135 GCCCGGCCTGACCTTCTCCAACGAGCTGATCTCGCGTGACGAGGGTCTGCACACCGACTT 628194 Query 443856 CGCCTGTCTTCTCT 443869 |||||| || |||| Sbjct 628195 CGCCTGCCTGCTCT 628208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588333293376185