Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq58 105 2e-17
>seq58
Length=769140
Score = 105 bits (116), Expect = 2e-17
Identities = 369/554 (67%), Gaps = 29/554 (5%)
Strand=Plus/Plus
Query 443330 GGCCCAGTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGA 443389
|||| ||| ||||| |||||||| || || |||||||| | || |||||| |
Sbjct 627670 GGCCTCGTTCTGGACGGCCGAGGAGATCGACCTGTCCAAGGATATCCATGACTGGAACAA 627729
Query 443390 ACGACTATCTAGCCATGAAC-GCGATTTCTTCAAAT-GCA---TCTTGGCCTTCTTTGCA 443444
|| || | | |||| ||| |||||||| | ||| ||||| ||||||| ||
Sbjct 627730 CCGCCTG---AACGATGACGAGCG-TTTCTTCATCTCGCACATTCTTG-CCTTCTTCGCC 627784
Query 443445 CCGAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGT--AGTGT 443502
|| ||||| || ||| ||||| ||||| ||||||| || ||| || ||
Sbjct 627785 GCGTCTGACGGCATTGTCAACGAGAACCTGGTCGAGCGTTTCAGCGCCGAGGTGCAG-GT 627843
Query 443503 ACACCGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGG 443562
| | |||||||||| |||||||| ||||| | ||||||||||| ||| |||||
Sbjct 627844 GC-CTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGA 627902
Query 443563 TCTACAGTCAGTTGATCAA-GACAC-TAATTCCGAACGAAGACGAACAGCGGTCCATCTT 443620
|||| || | || ||| ||||| || || || || | ||||| || || |
Sbjct 627903 CCTAC--TC-GCTGCTCATTGACACCTACATC--AAGGAGCCCTCGCAGCGCTCGTTCCT 627957
Query 443621 CT-CATCGTTCATGAC--CACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTG 443677
|| || || |||| || || ||||| | ||| | |||||| | | ||
Sbjct 627958 CTTCAACGCCATTGACACCATCCCCTGCATCCGCAAGAAGGCCGACTGGGCCATCCGCTG 628017
Query 443678 GCTCGA--ACGAGAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAA 443735
| || | || || | || || || | |||| || || || ||||| | |||||
Sbjct 628018 GATCCAGGACAAGGAGTCGTC--CTACGGCCAGCGCCTGGTTGCCTTTGCCGCCGTCGAG 628075
Query 443736 GGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTAT 443795
|| | || || ||||| || || | || ||||||||| | || ||||| || | ||
Sbjct 628076 GGCATCTTCTTCAGCGGT-GCCTTCTCGTCGATCTTCTGGGTCAAGAAGCGCGGCATGAT 628134
Query 443796 GCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTT 443855
|| ||| |||||||| ||||| |||||| || ||||||||| |||| ||||||
Sbjct 628135 GCCCGGCCTGACCTTCTCCAACGAGCTGATCTCGCGTGACGAGGGTCTGCACACCGACTT 628194
Query 443856 CGCCTGTCTTCTCT 443869
|||||| || ||||
Sbjct 628195 CGCCTGCCTGCTCT 628208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588333293376185
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |