Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq60 264 1e-65
>seq60
Length=1285956
Score = 264 bits (292), Expect = 1e-65
Identities = 950/1467 (65%), Gaps = 43/1467 (3%)
Strand=Plus/Plus
Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765
|||||||||| | ||||| || |||||||| || || || || | || || | |||
Sbjct 692840 GGTAGATGTTGGAGGTGTACGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTAC 692899
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
||| || ||||| || |||| || |||||||| |||| ||| | |||||| | |
Sbjct 692900 TGGCAGTGGGCATGGGAGCCAGCAGCAGACTGTTGCGAACACCGTGAAGCTTGATCTGCT 692959
Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884
|||| || ||||||||| || | | | || || || |||| |||||||||||||
Sbjct 692960 CCTTCAGGCTATCCCAGTCCCAGAGGTCGGTGGGCTTGACATTCC-ACATGTCAAACTGC 693018
Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944
|| | || || || ||||||| |||||| |||| |||| || | | | ||
Sbjct 693019 AGGATACCCTGAGAGACGGGAGAGCCCTCATAGGTGGAGTAGGTTCCCTCCTCCTTGGCG 693078
Query 110945 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 111004
| || | ||| ||| | ||||| || ||||| || ||||| | |||| |
Sbjct 693079 ATCTCCACGGAGGCCGACAGAGCAGCGTGGTAGATGGTCTCGAAGATCTGCTGGTTCAGC 693138
Query 111005 TCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGA 111059
||| || || | || ||||| |||| || | | ||| |||| || |
Sbjct 693139 TCCCGAGCCTCGGCGGACTCAAAGGGCATGCGCAGAGCGAGGAAAG-----CATCAGCCA 693193
Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 111118
|||| |||||||| | ||| || || | ||| ||||| || || | ||| || |||
Sbjct 693194 GACCCTGAACACCAACACCGATGGGGCGGTGGCGCATGTTG--CTGTTGCG-AGCCTCGG 693250
Query 111119 --ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
||||| || || ||||||| ||||| || || | ||| | | | ||||
Sbjct 693251 GCACGGGGTAGTGGTTGACATCAATGATGCGGTTCAGGTTGCGGACAACCACCATGGTGA 693310
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236
|| || || || ||| | ||| | || | | | | ||||| || || |
Sbjct 693311 CCTCGTGCAGCTTCTCAAAGTCATACACGCCCTTGTTGTAGTCAACATAGGCGGGCAGAG 693370
Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296
||| || |||| ||||| |||||| |||||| | | |||||| | || || |
Sbjct 693371 CGAGGGAGGCCAGGTTGCACACAGCCACCTCATCGGGAGCGCAGTACTCAATGATCTCAG 693430
Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356
| || | |||||| || ||| || |||| ||||| ||||| ||||| ||| ||
Sbjct 693431 TGCACAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTACAGT 693490
Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416
|||||||| |||||| |||| | || ||||| ||||| | | ||| || || | ||
Sbjct 693491 GGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACC 693550
Query 111417 AAA-CATCGGCGGCTGGTACAATGGCGTTGG---CCCGTCCCTCCGCCTCGTACTTTGTG 111472
| | | || | | || | |||| ||| | || ||||| ||||||||||| |
Sbjct 693551 ACAGCTTCTGAGCCTTG----ATGGTCTTGCGACCGCGACCCTCAGCCTCGTACTTCTCG 693606
Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532
|| ||||| || |||||||| || ||||| ||||| || || || || ||
Sbjct 693607 TACAGGGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGACCGGGGCACTCGTTGGGGCAC 693666
Query 111533 AAAAGAGACCATT-GACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591
| |||| ||| | | | |||| || || ||||||||||| || || || ||||||||
Sbjct 693667 ATCAGAGTCCACTCGGCGTTCTTC-TCGACACGCTTCATGAAGAGATCAGGGATCCACAG 693725
Query 111592 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 111651
| || | |||||| || |||| || | || ||||| || | || |
Sbjct 693726 AGCCAGGAACAAATCTCTGGCGCGGACCTCCTCCTTTCCATGGTTCTTGCGCAGATCCAT 693785
Query 111652 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTC 111707
|||||| | | ||| |||||||| ||||| ||||||| || | | || | |
Sbjct 693786 GAACTCGAACACATCGGCGTGCCACGGCTCGAGATAGATGGCAAAGGCGCCGGGGCGCTT 693845
Query 111708 GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 111767
| | ||| | || | ||||||||||| ||| ||| || || |||||||| || || |
Sbjct 693846 GTTG-CCACCCTGGTCAACATAGCGCGCGGTGTTGTTGAACACTCGAAGCATGGGGATGA 693904
Query 111768 TACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGA 111827
|||||| || ||||| || || |||| ||| | | || | | | ||||
Sbjct 693905 TACCATTGGACGTGCCATTGGTTCCGGCAATATAAGAACCAGTAGCACGGATACGGTGGA 693964
Query 111828 TGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCAT 111887
| | ||||| || |||||| ||| ||||| || || | | || || |||
Sbjct 693965 CATTGAGACCAATGCCGCCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCAT 694024
Query 111888 AGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTC 111947
||||||| | || ||| ||||| | | | |||||||| || | ||| || |
Sbjct 694025 AGATACCCTCAATGCTGTCATCCTTTATATCAACCAGGAAGCACGACGAGAGCTG-GGCC 694083
Query 111948 T-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACA 112004
| || |||||||| ||||||||||| || | || || ||| | | |||| |||||
Sbjct 694084 TGCGGGGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGA--AGAACTTGCTGGACA 694141
Query 112005 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCC 112064
|| || ||| ||||| | ||| || | || || || |||||| | || || |
Sbjct 694142 TCAAGTTGTAGGTCTCAATGACGCGCTCGACGTTGTCTCCCCAGATGCCAACAGCAACAC 694201
Query 112065 GCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA--AGATAGCT 112122
|||||| ||||| ||| ||| || | | |||| || ||| |||| || ||
Sbjct 694202 GCATGATCATGTGCTGGGGGCGCTCGACAATCTTGCCGTCAAGC--TTGAGCAGGTAAGA 694259
Query 112123 CTTCTCAAGGGTTTTGAGACCAAAGTA 112149
| ||| ||||| |||| ||||||||
Sbjct 694260 CCGCTCCAGGGTCTTGAAGCCAAAGTA 694286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628030955896800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |