Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq60 233 2e-56
seq58 96.9 4e-15
>seq60
Length=1285956
Score = 233 bits (258), Expect = 2e-56
Identities = 941/1465 (64%), Gaps = 43/1465 (3%)
Strand=Plus/Plus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| |||| ||||| |||||||||||||| ||||| || | || || | || |
Sbjct 692842 TAGATGTTGGAGGTGTACGGCTCAAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTG 692901
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| ||||||||||| |||| || || ||||| || | ||| | | | || | |||
Sbjct 692902 GCAGTGGGCATGGGAGCCAGCAGCAGACTGTTGCGAACACCGTGAAGCTTGATCTGCTCC 692961
Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGG 118361
|| || |||||||| || | | | || | | |||||| |||||||| |||
Sbjct 692962 TTCAGGCTATCCCAGTCCCAGAGGTCGGTGGGCTTGACATTCCACATGTCAAACTGCAGG 693021
Query 118362 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 118421
||||| || || | || || |||||| | || || | ||||| ||| || |
Sbjct 693022 ATACCCTGAGAGACGGGAGAGCCCTCATAGGTGGAGTAGGTTCCCTCCTCCTTGGCGATC 693081
Query 118422 TC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATT 118478
|| |||| || | || || ||||| || || || || || || | ||||
Sbjct 693082 TCCACGGAGGCCGAC---AGAGCAGCGTGGTAGATGGTCTCGAAGATCTGCTGGTTCAGC 693138
Query 118479 GCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGAGACC 118537
|| |||||| |||| ||||| | | || || | | || |||| || |||||
Sbjct 693139 TCCCGAGCCTCGGCGGACTCAAAGGGCATGCG-CAGAGCGAGGAAAGCATCAGCCAGACC 693197
Query 118538 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CAC 118594
|| ||||| | || || ||||| || | ||| || || ||||| ||| |||
Sbjct 693198 CTGAACACCAACACCGATGGGGCGGTGGCGCATGTTGCTGTTGCGAGC---CTCGGGCAC 693254
Query 118595 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 118654
||| || || ||| || | | || || || | || ||| | |||| ||
Sbjct 693255 GGGGTAGTGGTTGACATCAATGATGCGGTTCAGGTTGCGGACAACCACCATGGTGACCTC 693314
Query 118655 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 118714
|| ||||| || | ||| | || | | | | ||||| || || ||||
Sbjct 693315 GTGCAGCTTCTCAAAGTCATACACGCCCTTGTTGTAGTCAACATAGGCGGGCAGAGCGAG 693374
Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774
|| ||||| || ||||||| |||||| | | |||||| || || || |||||
Sbjct 693375 GGAGGCCAGGTTGCACACAGCCACCTCATCGGGAGCGCAGTACTCAATGATCTCAGTGCA 693434
Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834
|| ||| || || |||||| |||| |||||| || || ||| |||||| ||
Sbjct 693435 CAGGTTGGAGCTGCGAATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTACAGTGGTC 693494
Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA- 118893
|||||| |||||| | || | || ||||| || || | || ||| || || | ||| |
Sbjct 693495 CTTGTACAGCATGAAGGGGTTGCCGGTCTCGGTCTGAGCCTCGAGGATGGCATACCACAG 693554
Query 118894 CATCGGCAGCTGGCACAGTGGCGTTGG---CTCGCCCCTCTTCCTCGTACTTTGTGTAGA 118950
| || | || | ||| ||| | || ||||| |||||||||| ||| |
Sbjct 693555 CTTCTGAGCCTTGA----TGGTCTTGCGACCGCGACCCTCAGCCTCGTACTTCTCGTACA 693610
Query 118951 GGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 119010
|||| || ||||| || || | || | || || || || | ||||| | |
Sbjct 693611 GGGCCTCGAACTCCTCGCCGTAGCAGTCGGCAAGACCGGGGCACTCGTTGGGGCACATCA 693670
Query 119011 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 119070
||| ||| | | || ||| || |||||||||||||| || |||||||| || |||
Sbjct 693671 GAGTCCACTCGGCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGAGCCA 693730
Query 119071 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 119130
||| | ||| | ||| | || || | || || || |||| |||| || |
Sbjct 693731 GGAACAAATCTCTGGCGCGGACCTCCTCCTTTCCATGGTTCTTGCGCAGATCCATGAACT 693790
Query 119131 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTACGAC 119184
| | | ||| ||||||||||| || || || | || | | || ||| |
Sbjct 693791 CGAACACATCGGCGTGCCACGGCTCGAGATAGATGGCAAAGGCGCCGGGGCGCTT--GTT 693848
Query 119185 GACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATAC 119244
| ||| |||||| ||||| | ||| ||| ||| || || |||||||| || |||||||
Sbjct 693849 G-CCACCCTGGTCAACATAGCGCGCGGTGTTGTTGAACACTCGAAGCATGGGGATGATAC 693907
Query 119245 CATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGT 119304
||| ||| |||||| || || |||| ||| | | || | || | ||||| |
Sbjct 693908 CATTGGACGTGCCATTGGTTCCGGCAATATAAGAACCAGTAGCACGGATACGGTGGACAT 693967
Query 119305 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 119364
| |||||| || || ||| ||| ||||| ||||| | |||| || | ||||
Sbjct 693968 TGAGACCAATGCCGCCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCATAGA 694027
Query 119365 TCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG- 119423
| || || || |||| |||| | | | |||||||| ||| | || ||||||
Sbjct 694028 TACCCTCAATGCTGTCATCCTTTATATCAACCAGGAAGCACGACGAGAGCTG-GGCCTGC 694086
Query 119424 GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCT 119481
|| ||||||||||||||||| || || | || ||| ||| | | |||| |||||||
Sbjct 694087 GGGGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGA--AGAACTTGCTGGACATCA 694144
Query 119482 TGTCGTAGGTCTCCAAGACG-GCGGGA--ATGTCTTCCCCGTGAATACCGATCGAGACCC 119538
|| ||||||||| | |||| || || ||||| ||| | || || | | || |
Sbjct 694145 AGTTGTAGGTCTCAATGACGCGCTCGACGTTGTCTCCCCAG---ATGCCAACAGCAACAC 694201
Query 119539 GCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCT 119598
|||| | ||||| ||||| || | | | || || ||| | | |||||| |
Sbjct 694202 GCATGATCATGTGCTGGGGGCGCTCGACAATCTTGCCGTCAAGCTTGAGCAGGTAAGACC 694261
Query 119599 TCTCCAAGGTCTTGAGACCAAAATA 119623
||||| |||||||| ||||| ||
Sbjct 694262 GCTCCAGGGTCTTGAAGCCAAAGTA 694286
>seq58
Length=769140
Score = 96.9 bits (106), Expect = 4e-15
Identities = 289/441 (66%), Gaps = 4/441 (1%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| ||||| ||||||||||||||||| ||||| ||| ||| ||| ||||||||
Sbjct 628485 TAGTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAGATGTTCTCCATG 628426
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| ||||| ||||| | | || | | | || | | | | || || ||
Sbjct 628425 AAGTCAAAGGGGTTGGTGGCCTTGTACACCTTCTCGTTGCCGAGAGCGACC-AGCAGGCG 628367
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
|| | |||| |||| ||||||| |||| || |||||| || | ||| ||
Sbjct 628366 GTCGGCGACGAACTCGATGTACTGCTTCATCAGGGTGGCGTTCATGCCCAGCAGGGCGCA 628307
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| || || || ||||||| ||| ||| ||| |||| || || | ||| ||
Sbjct 628306 GGGCAGAGCCTCGGTGATGAACTCCTGCTCGATGGCCACGGCATCGGTGATGATTCTCTG 628247
Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTT-GAAGAGTTCCACGGCAAACTCCT 130025
||| ||| ||| || | | || | || |||||| ||| || ||
Sbjct 628246 GATGACGTCCTTGCTGGGGCGGT-GCTTGAGGTGGGAGAAGAGCAGGCAGGCGAAGTCGG 628188
Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085
||| |||||||||||||| ||||| || || || |||||| ||| || ||||| | |
Sbjct 628187 TGTGCAGACCCTCGTCACGCGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATCATGC 628128
Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145
| |||||||| | |||||| |||| | || | || ||||||||| ||||| ||
Sbjct 628127 CGCGCTTCTTGACCCAGAAGATCGACGAGAAGGCACCGCTGAAGAAGATGCCCTCGACGG 628068
Query 130146 ACGCGAACGCAAAGAGACGCT 130166
|| || |||| || ||||
Sbjct 628067 CGGCAAAGGCAACCAGGCGCT 628047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434171851480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |