Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq60 286 4e-72
seq58 91.5 2e-13
>seq60
Length=1285956
Score = 286 bits (316), Expect = 4e-72
Identities = 914/1396 (65%), Gaps = 35/1396 (3%)
Strand=Plus/Minus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA---TTGATTC 104277
||| ||| ||||| ||||||| || || | || || |||||| |||| | ||
Sbjct 694221 CCCCCAGCACATGATCATGCGTGTTGCTGTTGGCATC--TGGGGA-GACAACGTCGAGCG 694165
Query 104278 TGTCTTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACC 104335
||| | ||||| ||| || ||||||| |||| | | ||| || || | || |||
Sbjct 694164 CGTCATTGAGACCTACAACTTGATGTCCAGCAAGTTCT--TCACCCATGCCTCCCCCACC 694107
Query 104336 CTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAG 104395
|||||||| |||||||| || |||| | || |||||||| | | | |||
Sbjct 694106 CTCTTCAACGCTGGTACCCCGCAGGCCCAGCTCTCGTCGTGCTTCCTGGTTGATATAAAG 694047
Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455
|| ||| || | |||||||||| || || | | || || ||||| ||| |
Sbjct 694046 GATGACAGCATTGAGGGTATCTATGACACCCTCAAGACCTGCGCCATGATCTCCAAGATG 693987
Query 104456 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515
||||| || ||||| | | |||| | | | || | | ||| |||| ||
Sbjct 693986 GCTGGCGGCATTGGTCTCAATGTCCACCGTATCCGTGCTACTGGTTCTTATATTGCCGGA 693927
Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575
|| ||||| || ||||||| || || |||||||| || || ||| ||| ||||||
Sbjct 693926 ACCAATGGCACGTCCAATGGTATCATCCCCATGCTTCGAGTGTTCAACAACACCGCGCGC 693867
Query 104576 TATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATG 104631
||||| | || | ||| | | | | || | | || ||||||| ||||| ||
Sbjct 693866 TATGTTGACCAGGGTGG-CAACAAGCGCCCCGGCGCCTTTGCCATCTATCTCGAGCCGTG 693808
Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691
|||||| ||| | | |||||| | || |||| ||||| || | ||||||| ||
Sbjct 693807 GCACGCCGATGTGTTCGAGTTCATGGATCTGCGCAAGAACCATGGAAAGGAGGAGGTCCG 693748
Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751
| | ||| | ||| ||||| ||||| || ||||||||||||||| | || ||| |
Sbjct 693747 CGCCAGAGATTTGTTCCTGGCTCTGTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAA 693688
Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811
|| | | | ||| |||| | || || || || || ||||| |||| | ||
Sbjct 693687 GAACGCCGAGTGGACTCTGATGTGCCCCAACGAGTGCCCCGGTCTTGCCGACTGCTACGG 693628
Query 104812 TGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC--GACG 104869
|||||||| || ||||| ||| |||||||||| || |||| ||| || |||
Sbjct 693627 CGAGGAGTTCGAGGCCCTGTACGAGAAGTACGAGGCTGAGGGTC--GCGGTCGCAAGACC 693570
Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928
| | || | || | ||||| | || || ||| || |||| |||||||| || | ||
Sbjct 693569 AT-CAAGGCTCAGAAGCTGTGGTATGCCATCCTCGAGGCTCAGACCGAGACCGGCAACCC 693511
Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988
| |||||| ||||| ||| |||||||| ||||| || || ||||| ||||| ||
Sbjct 693510 CTTCATGCTGTACAAGGACCACTGTAACCGCAAGAGCAACCAGAAGAACCTGGGTACCAT 693451
Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048
|| ||||| || || || || ||| | || | | |||||| ||||||
Sbjct 693450 TCGCAGCTCCAACCTGTGCACTGAGATCATTGAGTACTGCGCTCCCGATGAGGTGGCTGT 693391
Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTT 105106
||| ||||| || || ||||||| ||| ||||| || | | | |||| | | | |
Sbjct 693390 GTGCAACCTGGCCTCCCTCGCTCTGCCCGCCTATGTTGA-CTACA-ACAAGGGCGTGTAT 693333
Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166
|| | ||| || || ||||| || || | || | ||||| ||| | | |||
Sbjct 693332 GACTTTGAGAAGCTGCACGAGGTCACCATGGTGGTTGTCCGCAACCTGAACCGCATCATT 693273
Query 105167 GATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223
||| || |||||||| ||| ||||| || || ||| | ||||| ||
Sbjct 693272 GATGTCAACCACTACCCCGTGCCCGAG---GCTCGCAACAGCAACATGCGCCACCGCCCC 693216
Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGA 105282
|| ||| | |||||||||||||| || |||| ||| | || || ||| | |||||
Sbjct 693215 ATCGGTGTTGGTGTTCAGGGTCTGGCTGATGCTTTCCTCGCTCTG-CGCATGCCCTTTGA 693157
Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342
|||| ||| || ||| | || || || || |||||||| || ||||| |||||
Sbjct 693156 GTCCGCCGAGGCTCGGGAGCTGAACCAGCAGATCTTCGAGACCATCTACCACGCTGCTCT 693097
Query 105343 TGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402
||| ||| | || ||| || || | || |||| |||||| |||||
Sbjct 693096 GTCGGCCTCCGTGGAGATCGCCAAGGAGGAGGGAACCTACTCCACCTATGAGGGCTCTCC 693037
Query 105403 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGA 105462
| || || || | || || ||||| |||||| | | || ||| | || ||
Sbjct 693036 CGTCTCTCAGGGTATCCTGCAGTTTGACATGTGGAATGTCAAGCCCACCGACCTCTGGGA 692977
Query 105463 CTGGGA-AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGG 105521
|||||| ||| || ||||| | |||||| | ||| |||| |||||||| || |||
Sbjct 692976 CTGGGATAGC-CTGAAGGAGCAGATCAAGCTTCACGGTGTTCGCAACAGTCTGCTGCTGG 692918
Query 105522 CTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCT 105581
|||| ||||| || ||| ||| | || || | || || || || |||||||| || |
Sbjct 692917 CTCCCATGCCCACTGCCAGTACCTCGCAGATTCTTGGCAACAACGAGTGCTTTGAGCCGT 692858
Query 105582 ACACGACGAACATCTA 105597
|||| | ||||||||
Sbjct 692857 ACACCTCCAACATCTA 692842
>seq58
Length=769140
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 94805 AGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTA 94864
|||| || | || ||||| || ||||| ||||||||| ||| |||||| | |
Sbjct 628047 AGCGCCTGGTTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCTCGTCGA 628106
Query 94865 TTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCT 94924
| | ||| |||||||||| || | ||||| || || ||||||||||||||| ||||
Sbjct 628107 TCTTCTGGGTCAAGAAGCGCGGCATGATGCCCGGCCTGACCTTCTCCAACGAGCTGATCT 628166
Query 94925 CTCGTGACGAGGGACTCCAC 94944
| ||||||||||| || |||
Sbjct 628167 CGCGTGACGAGGGTCTGCAC 628186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259830328920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |