Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq101 96.9 2e-15
>seq101
Length=737149
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|||| ||||||||||||||||| || ||||| || || ||||| || || | || ||
Sbjct 590426 ACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCG 590367
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| || || || || || || | ||||| |||||||| || | |||||||| || ||
Sbjct 590366 AGCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTATC-CTG 590308
Query 34618 ATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676
| || | || ||| || ||| || || | |||||||||| || ||||| ||
Sbjct 590307 AATCTTCGACTTCACGTTATCAATGGTATCCGAGGATTCCACTTCCAACGTAATCGTCTT 590248
Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || | || ||||| || ||||||||
Sbjct 590247 TCCCGTCAGAGTCTTCACGAAGATCTGCAT 590218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729089842989
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |