Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq60 132 7e-26 >seq60 Length=1285956 Score = 132 bits (146), Expect = 7e-26 Identities = 273/404 (68%), Gaps = 4/404 (1%) Strand=Plus/Plus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 || ||||| || || |||||||||| | ||| || | | | || || || ||||| Sbjct 693646 CCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCGGCGTTCTTCTCGACACGCTTCATG 693705 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 ||||||||||| ||||| ||||| | || | ||||| || | || || ||||| Sbjct 693706 AAGAGATCAGGGATCCACAGAGCCAGGAACAAATCTCTGGCGCGGACCTCCTCCTTTCCA 693765 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 ||||| ||||| | ||||| | | ||| | ||||| || || ||||| || Sbjct 693766 TGGTTCTTGCGCAGATCCATGAACTCGAACACATCGGCGTGCCACGGCTCGAGATAGATG 693825 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | || || || || || || ||||| || | ||| | |||||||| || | Sbjct 693826 GCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCAACATAGCGCGCGGTGTTGTTGAAC 693885 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 |||| | ||| || || ||||| || || || ||||| ||||| | ||||||| ||| Sbjct 693886 ACTCGAAGCATGGGGATGATACCATTGGACGTGCCATTGGTTCCGGCAATATAAGAACCA 693945 Query 78255 CTTGCGCGAATA--TTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 | || || ||| | || || | || || || || |||||||| || || | | Sbjct 693946 GTAGCACGGATACGGTGGACATTGAGA--CCAATGCCGCCAGCCATCTTGGAGATCATGG 694003 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCC 78356 |||| || | || || ||||||||||| || ||||||||| Sbjct 694004 CGCAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCC 694047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667645113120