Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11] 133 sequences; 35,489,142 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq60 127 3e-24 >seq60 Length=1285956 Score = 127 bits (140), Expect = 3e-24 Identities = 270/403 (67%), Gaps = 0/403 (0%) Strand=Plus/Plus Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCAT 76608 ||| || || || || || ||||||| | |||||| | | | || || || ||||| Sbjct 693645 ACCGGGGCACTCGTTGGGGCACATCAGAGTCCACTCGGCGTTCTTCTCGACACGCTTCAT 693704 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 ||||||||||| ||||| ||||| | || | ||||| || | || || ||||| Sbjct 693705 GAAGAGATCAGGGATCCACAGAGCCAGGAACAAATCTCTGGCGCGGACCTCCTCCTTTCC 693764 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 ||||| ||||| | |||||| | | ||| | ||||| || || ||||| || Sbjct 693765 ATGGTTCTTGCGCAGATCCATGAACTCGAACACATCGGCGTGCCACGGCTCGAGATAGAT 693824 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 || | | || || || || || || ||||| || | ||| | || ||||| || | Sbjct 693825 GGCAAAGGCGCCGGGGCGCTTGTTGCCACCCTGGTCAACATAGCGCGCGGTGTTGTTGAA 693884 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 |||| | ||| || || || || || || || ||||| ||||| | ||||||| || Sbjct 693885 CACTCGAAGCATGGGGATGATACCATTGGACGTGCCATTGGTTCCGGCAATATAAGAACC 693944 Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908 | ||||| ||| | | || || || || || ||||| || ||||| | || Sbjct 693945 AGTAGCACGGATACGGTGGACATTGAGACCAATGCCGCCAGCCATCTTGGAGATCATGGC 694004 Query 76909 ACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCC 76951 ||| || | ||||||||||| ||||| || || |||||| Sbjct 694005 GCAGGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCC 694047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933214746560