Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq144 104 2e-17 seq125 89.7 4e-13 >seq144 Length=62325 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | ||||| ||||||||||| || ||||| ||||| | |||||| || |||| Sbjct 23709 AGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCT 23650 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| ||||| || | || |||||||||||||| || | ||||||||||| Sbjct 23649 TCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTCC 23590 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||| || || | | ||| ||| || | ||| || | || |||||| Sbjct 23589 TGAATCTTGCTCTTGACGTTGTCGATAGTGTCGGATGACTCAACCTCGAGAGTGATGGTC 23530 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| || || || || || || || ||||| Sbjct 23529 TTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 23498 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| | || || |||| ||||| || |||||||| || ||||| ||||| | Sbjct 23952 CCACCTCGTAATCTCAGAACCAGGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCTGAG 23893 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | ||||||| || || ||||| || | || |||| ||| ||||| || Sbjct 23892 AGTGTTCTGCCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGTGGA 23833 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||| || || || | | ||| || || || || | Sbjct 23832 ATGCCTTCCTTGTCTTGGATTTTCGACTTGACATTGTCGATTGTGTCGGAGGATTCAACT 23773 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||| ||||| |||| || |||||||| |||||||| Sbjct 23772 TCGAGCGTGATGGTTTTGCCTGTTAGAGTCTTGACAAAGATTTGCAT 23726 >seq125 Length=76066 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| || | ||| || | ||| | ||||||||||| || ||||| ||||||| Sbjct 47311 CCACCTCGAAGACGGAGTACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 47370 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| || | ||||| ||||| ||||| || | || | || ||||||||| || Sbjct 47371 AGAGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGG 47430 Query 21069 ACGCCTTCCTTGTC 21082 | |||||||||||| Sbjct 47431 ATGCCTTCCTTGTC 47444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422256575395160