Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq53 316 2e-81 seq144 134 1e-26 seq130 123 3e-23 seq125 93.3 4e-14 >seq53 Length=169705 Score = 316 bits (350), Expect = 2e-81 Identities = 544/783 (69%), Gaps = 19/783 (2%) Strand=Plus/Minus Query 116663 GCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGC 116722 || ||||||||||| | |||||||| ||||||||||| ||| ||||||| | | Sbjct 76912 GCTTCGTTCTGGACTGCTGAGGAGGTCGACCTGTCCAAAGACCTCCACGACTGGCACAAC 76853 Query 116723 TTG---AACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGC 116779 | |||||| | || || |||||||| |||||||| ||||| ||||| ||| Sbjct 76852 AAGCTCAACGACGATGAACGTTATTTCATCTCCCACGTGCTCGCCTTCTTCGCTGCCTCT 76793 Query 116780 GACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAG 116839 |||||||||||||||||||| || ||||||| ||| || || || || || |||| Sbjct 76792 GACGGCATCGTCAACGAGAACCTCCTCGAGCGCTTCTCTGGTGAAGTCCAAGTTCCCGAA 76733 Query 116840 GCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCG 116899 || || |||||||| ||||| |||||| ||||||||| | ||||| || ||||| Sbjct 76732 GCTCGATGCTTCTATGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGATGTACAGC 76673 Query 116900 ACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATC 116959 ||||| ||||| |||||| || |||||| |||| |||| ||| Sbjct 76672 TTGCTCATTGACACATACGTGAAGGAGCAAAAGCAGAAGCAGTACCTGTTCGACGCTATC 76613 Query 116960 GAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGA 117019 || || || || || ||| |||||||||| ||||| || || |||||| | | || Sbjct 76612 GACACAATCCCATGTATCAGGAAGAAGGCCGAATGGGCTCTTCGATGGATCTCAGACAAG 76553 Query 117020 GAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCG 117079 ||| | | |||| |||| || || ||||| || ||||||||||| | ||||| || Sbjct 76552 GAGAGCACATTCGCTCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATTTTCTTCTCC 76493 Query 117080 GGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTC 117139 ||| || ||| |||| || ||||||||||| || || |||||||| || || || ||| Sbjct 76492 GGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTTACCTTC 76433 Query 117140 AGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTC 117199 |||||| ||||||||| | |||||||| |||| ||||| || || | || || Sbjct 76432 TCCAACGAACTCATCTCCCGAGACGAGGGCATGCACACTGACTTCGCATGCCTCCTTCTC 76373 Query 117200 AAGCATTTGGTGCAGCGACCGAGC-GCGGCGCGCGTCAGGGAGA---TCGTCACCGACGC 117255 || | || | |||| | | | |||| |||| || ||| ||| || Sbjct 76372 TCCCACCT----CAACCACCGTCCATCAAAGGATGTCATTGAGAAAGTCATCATCGAGGC 76317 Query 117256 GGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAA 117315 |||| |||||||||| ||||| || ||||| || || || |||| |||| | || Sbjct 76316 CGTCGGCATCGAGCAGGAATTCCTTACGGAAGCCCTCCCCGTCGCTCTGTTGGGCATGAA 76257 Query 117316 TTGCGAAAC---GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGC- 117371 | | || ||| ||| || |||||||||||||||||| | ||| || || ||| Sbjct 76256 ---CCATACCCTCATGAAGCAGTATATCGAGTTCGTCGCCGACCGACTGTTGGTC-AGCA 76201 Query 117372 TGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTCCT 117431 ||| | ||||| ||||||| | ||||||| | ||||| ||| | ||||||| Sbjct 76200 TGGGCAATCCCAAGTACTACAAGGCTACCAACCCATTCGACTTCATGGAGAACATCTCCC 76141 Query 117432 TGG 117434 ||| Sbjct 76140 TGG 76138 >seq144 Length=62325 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | || ||||| |||||||| |||| || || | || Sbjct 23498 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCATCC 23557 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || |||| ||||| || || || || | ||||| Sbjct 23558 GACACTATCGACAACG-TCAAGAGCAAGATTCAGGACAAGGAAGGAATTCCTCCTGACCA 23616 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| |||| |||| ||| ||||| ||||| || |||| || |||||| ||||||||| Sbjct 23617 GCAGAGACTGATCTTCGCTGGCAAGCAGCTTGAAGACGGCCGAACCCTCTCCGACTACAA 23676 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||| |||| |||||||| ||| Sbjct 23677 CATCCAGAAGGAGTCCACCCTGCATCTTGTG 23707 Score = 127 bits (140), Expect = 2e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || |||||||||||||| |||| || ||| || || Sbjct 23726 ATGCAAATCTTTGTCAAGACTCTAACAGGCAAAACCATCACGCTCGAAGTTGAATCCTCC 23785 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| ||||| | ||||| || ||||| || | ||||| Sbjct 23786 GACACAATCGACAATGTCAAGTCGAAAATCCAAGACAAGGAAGGCATTCCACCCGACCAA 23845 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACG--AGCGCACCCTCAACGACTACA 40867 || ||||| |||| ||| ||||| || || || |||| || ||| |||| ||||||| Sbjct 23846 CAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGCAGAACACTCTCA--GACTACA 23903 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||| | ||| |||| || || Sbjct 23904 ACATCCAGAAGGAGTCGACGTTGCACCTGGT 23934 Score = 123 bits (136), Expect = 3e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || ||||| ||||| ||||||||| | || ||||| | Sbjct 23267 AAGATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGTCT 23326 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | ||||| | | | | | ||| || || | ||||| |||||||| ||| | ||| Sbjct 23327 AGCGACACCATCGATAATGTAAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCCGAC 23386 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || ||||| || || | ||| || |||||||| || || | |||||| | | ||||||| Sbjct 23387 CAACAACGTCTTATTTTCGCTGGTAAACAGCTTGAAGATGGTCGCACCTTGAGCGACTAC 23446 Query 40867 AACATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||| ||| | || || || Sbjct 23447 AACATCCAGAAAGAGTCAACCCTCCA 23472 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || || ||||| || | || |||||| | | Sbjct 23954 ATGCAGATTTTTGTCAAGACTCTTACTGGAAAGACCATTACTTTGGAAGTCGAATCTTCA 24013 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| ||||| || ||| |||| || Sbjct 24014 GACACCATTGACAACG-TCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCCCCGGATCA 24072 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||| | |||| || || || || |||| || | || || || ||||||||| Sbjct 24073 ACAGCGATTAATCTTTGCTGGTAAGCAATTGGAGGATGGTCGTACTCTTTCCGACTACAA 24132 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| ||||||||| |||||| || || || | || |||| || || Sbjct 24133 CATTCAGAAGGAGAGCACGCTACACCTGGTTCTCCGACTGAGAGGAGG 24180 >seq130 Length=70983 Score = 123 bits (136), Expect = 3e-23 Identities = 136/181 (75%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || ||||||||||| ||||||||| | || ||||| || | |||| | | Sbjct 38170 TTCGTTAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCAGACACCATC 38111 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| ||||| ||||| | |||||||| ||| | Sbjct 38110 GACAATGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCACCCGACCAGCAGCGATTG 38051 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || ||||| || |||| || |||||| ||||||||||||||||||| Sbjct 38050 ATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGAACCCTCTCCGACTACAACATCCAGAAG 37991 Query 40879 G 40879 | Sbjct 37990 G 37990 >seq125 Length=76066 Score = 93.3 bits (102), Expect = 4e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| || |||||||| | |||||||| ||| | |||| ||| ||||| ||||| || Sbjct 47444 GACAAGGAAGGCATCCCACCCGACCAGCAGCGATTGATCTTCGCCGGCAAGCAGCTCGAG 47385 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || | || || || ||||||||||||||||||||| |||| || ||||| || Sbjct 47384 GATGGCCGAACTCTTTCGGACTACAACATCCAGAAGGAGTCCACCCTCCATCTCGT 47329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515215915477600