Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq144 140 3e-28 seq53 84.2 2e-11 >seq144 Length=62325 Score = 140 bits (154), Expect = 3e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||||| || |||||||| || |||||||| ||||||| ||||| ||| || Sbjct 23479 CACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTC 23420 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647 |||||||| |||||| | || ||||| || || ||||| || ||||||||||||| ||| Sbjct 23419 AAGCTGTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCCTCCTTGTCCTG 23360 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 | || | ||| || | |||| |||||| | ||||||||| | ||| | || | Sbjct 23359 GATCTTGCTCTTT-ACATTATCGATGGTGTCGCTAGACTCGACCTCAAGGGTGATGGTCT 23301 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || || || |||||||| Sbjct 23300 TGCCAGTGAGGGTCTTGACGAAGATCTGCAT 23270 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| ||| | ||| || |||||| | || || ||||| | Sbjct 24145 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGACCATCCTCCAATTGCTTACCAGCAAA 24086 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| | ||||| ||||| || || || |||||||||||| ||| || || || | Sbjct 24085 GATTAATCGCTGTTGATCCGGGGGAATACCCTCCTTGTCTTGAATCTTGGACTTGACGTT 24026 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 || | |||||| | ||||| || | || | || || || || ||||| || || Sbjct 24025 GTCAATGGTGTCTGAAGATTCGACTTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTGAC 23966 Query 118727 AAAAATCTGCAT 118738 |||||||||||| Sbjct 23965 AAAAATCTGCAT 23954 >seq53 Length=169705 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45073 CGAAGCCGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGG 45132 ||| ||||| | ||||||| |||||| || | || || || |||| | || |||| Sbjct 76322 CGAGGCCGTCGGCATCGAGCAGGAATTCCTTACGGAAGCCCTCCCCGTCGCTCTGTTGGG 76263 Query 45133 AATGAACGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTCCA 45192 |||||| | | |||| |||| || ||||| |||||||| || || | ||| Sbjct 76262 CATGAACCATACCCTCATGAAGCAGTATATCGAGTTCGTCGCCGACCGACTGTTGGTCAG 76203 Query 45193 GTTAAAGTATCCCAAGATGTACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTC 45252 | |||||||| ||| | || ||||||||||| || ||| | || || || Sbjct 76202 CATGGGCAATCCCAAGTACTACAAGGCTACCAACCCATTCGACTTCATGGAGAACATCTC 76143 Query 45253 GTTGGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATACAAG 45301 ||| ||||| ||||| || || ||||| |||||||| || ||| || Sbjct 76142 CCTGGCCGGCAAGACTAACTTCTTCGAGAAGCGCGTCGGTGATTACCAG 76094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433827703472920