Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq144 118 7e-22 seq130 91.5 1e-13 >seq144 Length=62325 Score = 118 bits (130), Expect = 7e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234 ||||| |||||||| || || || ||||| ||||||||||| || || | | || Sbjct 23940 CTCAGAACCAGGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCTGAGAGTGTTCTGCCG 23881 Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294 || || | |||||||| ||||| || || ||||| |||||| || | || |||||| Sbjct 23880 TCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGTGGAATGCCTTCCTTG 23821 Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354 || || || ||| | || | | || | |||| ||||| || || | ||||||| Sbjct 23820 TCTTGGATTTTCGACTTGACATTGTCGATTGTGTCGGAGGATTCAACTTCGAGCGTGATG 23761 Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || ||||| || |||||||| ||||| Sbjct 23760 GTTTTGCCTGTTAGAGTCTTGACAAAGATTTGCAT 23726 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTC 34236 ||||||| ||| | || |||||||| |||||||||||| || | || || | || Sbjct 23481 AGCACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTCAAGGTG-CGACCATC 23423 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 || | ||| || || |||||||| || || || |||||| ||| | || ||||||||| Sbjct 23422 TTCAAGCTGTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGGGAATGCCCTCCTTGTC 23363 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||||| || | || | ||| | || ||||| || | |||||||| Sbjct 23362 CTGGATCTTGCTCTTTACATTATCGATGGTGTCGCTAGACTCGACCTCAAGGGTGATGGT 23303 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| ||||| || || || |||||||||||| Sbjct 23302 CTTGCCAGTGAGGGTCTTGACGAAGATCTGCATC 23269 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||||| || || || ||||| |||||||||||||| || ||| | || Sbjct 24165 AGAACCAGGTGTAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGACCATCC 24106 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 ||||| ||||| || || || || | ||||| || || ||| | | ||||||||| Sbjct 24105 TCCAATTGCTTACCAGCAAAGATTAATCGCTGTTGATCCGGGGGAATACCCTCCTTGTCT 24046 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | || | |||||||| |||| || ||||| Sbjct 24045 TGAATCTTGGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACTTCCAAAGTAATGGTC 23986 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || ||||| || ||||| |||||||| Sbjct 23985 TTTCCAGTAAGAGTCTTGACAAAAATCTGCAT 23954 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| || ||| |||| || | ||||||||| ||||| Sbjct 23688 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCAAGCTGCTTGCCAGCGAAG 23629 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || | ||||||||| || | | |||||||| ||||| ||| | | | Sbjct 23628 ATCAGTCTCTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGAATCTTGCTCTTGACGTTG 23569 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| || || || || | |||||||| ||||| || | || ||||| Sbjct 23568 TCGATAGTGTCGGATGACTCAACCTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACG 23509 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 23508 AAGATCTGCAT 23498 >seq130 Length=70983 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| |||||||||||||| || ||| |||| || | |||||| || ||||| || Sbjct 37992 TTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 38051 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 | |||||||||||| || | | ||||||||| ||||| ||| | || | | Sbjct 38052 AATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCG 38111 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381 || | || | || ||||| || | |||||||| ||||| ||||| || || || ||| Sbjct 38112 ATGGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAG 38171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323069991905600