Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq53 96.9 3e-15 >seq53 Length=169705 Score = 96.9 bits (106), Expect = 3e-15 Identities = 220/329 (67%), Gaps = 4/329 (1%) Strand=Plus/Plus Query 16277 TCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCA 16336 ||||| || || |||||||||||||| || ||||| || || | ||| || || | |||| Sbjct 76425 TCGTTGGAGAAGGTAAGACCTGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCA 76484 Query 16337 AATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTAC 16396 || || || || ||||| ||||| || || || ||||| || || | |||| | || | Sbjct 76485 AACGAGCCGGAGAAGAAAATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCGAAT 76544 Query 16397 GTTCTAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTC 16456 || || | || | |||||| |||||| | || || | | | ||| Sbjct 76545 GTGCTCTCCTTGTCTGAGATCCATCGAAGAGCCCATTCGGCCTTCTTCCTGATACATGGG 76604 Query 16457 ATGTTCTCTATTGCATTAAATAAATAAt--ttttttCTTTGCTATCTAAAATATAAGTAT 16514 || | || || || | || | || | || | |||||| | | ||| || | Sbjct 76605 ATTGTGTCGATAGCGTCGAACAGGTACTGCTTCTGCTTTTGCTCCTTCACGTAT--GTGT 76662 Query 16515 CTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAA 16574 | || || || || ||||| || || || || |||||||| ||||| || ||||| | Sbjct 76663 CAATGAGCAAGCTGTACATCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGA 76722 Query 16575 AGCATCTAGCTTCGGATATTTGTACTTCA 16603 |||||| |||||||| | ||| |||||| Sbjct 76723 AGCATCGAGCTTCGGGAACTTGGACTTCA 76751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462509051486000