Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq52 345 4e-90 seq53 168 6e-37 seq144 125 6e-24 >seq52 Length=173047 Score = 345 bits (382), Expect = 4e-90 Identities = 1228/1898 (65%), Gaps = 49/1898 (3%) Strand=Plus/Minus Query 22104 TCTTG-TCCACTGTAAACTGTATGG---CGTTTGCGGCCGGTTTGGTGCGAAGATAATAC 22159 ||||| || ||||| ||||| || | || ||||||| | || || || || ||| Sbjct 73296 TCTTGGTCGACTGTGAACTGAATTGGTGCGGATGCGGCCA---TCGTTCGGAGGTAGTAC 73240 Query 22160 ATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTT--CCAT 22217 || |||||||| |||||||||||||| | || || || ||||| ||| || |||| Sbjct 73239 ATACCCGTCTTGAGACCCATCTTCCAGCCAGCGAAGTGCATGGACGT-AATCTTGCCCAT 73181 Query 22218 AACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGAT 22277 | ||| | || | | |||| ||||| ||||| || || || || || | Sbjct 73180 GGTT-GGCTCTTTCAAATGGATGTTGAGAGACTGCGATTGATCAATGAAAGCACCACGGT 73122 Query 22278 CGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCC 22337 |||||||||| | || | || || || || ||||| ||||||||||| || | Sbjct 73121 CGGCGGCCATTTGGATGATCGTTCGTTGTGAGATCTCCCAGACGGTCTTGTAGAGGGCCT 73062 Query 22338 TGATCTCTAACGGTATCGATTCGATCC--TCTGGACGGACCCGTTATTGTGTATGATCAA 22395 | || || || || |||| | | |||| ||| || || | ||||| Sbjct 73061 TAATATCAGCTGGGATG--TTCGGGACGTTTTGGATGGAGCCTCCATCGGCGATGATTCT 73004 Query 22396 ATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAA----TCTTTGACCAGATGAC 22451 || || || | || ||| | ||| | | |||| || |||| || | Sbjct 73003 GTTCTTCATGTTGTCTGACCATAGACCAA----GATCAACAAGGTCCTTGAGAAGCCAAG 72948 Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACG 22511 |||| || ||||| || ||||| | |||||| || || ||| |||||||| ||| | | Sbjct 72947 GGTTGACGACTTGGAATTCGCCAGCCAAGACTCGACGAGAGTAGATGTTGGACGTGTATG 72888 Query 22512 GTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCA 22571 | ||||| | || ||||| |||| ||||| | ||| || || || ||||| || || | Sbjct 72887 GCTCGAAGCACTCGTTGTTGCCCAAAATCTGTGAGGTAGATGCAGTTGGCATAGGAGCAA 72828 Query 22572 ACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCC 22631 || |||||||| | | || |||| | || || ||| | | |||||||| Sbjct 72827 CGAGGAGCGAGTTGCGAACACCATGCTGAGCGATCTTCGCCTTCAAGCTGTCCCAGTCCC 72768 Query 22632 ACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGAC-TCG 22688 | ||||||| || ||||| |||| | |||||| || | | ||| | || ||| Sbjct 72767 AAAGATCGGTAGGTGTCACTC---CCCAGAGATCGTACTGAAGCTGGCCTTGGGAGATCG 72711 Query 22689 CCGGGCTGCCTTCGTACGTTTCGTACGGACC-ATATATCGCGGCAAGTTCGCAGCTCGCC 22747 || || |||| || || || || ||||| | | | |||| || ||||| || Sbjct 72710 GCGAGC---CTTCATATGTCTCATAAGGACCCAGCTGTT-CGGCGAGCTCGCATGATGCG 72655 Query 22748 TCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACG 22807 ||| || ||| || || ||||||||||| | |||||| | ||| | | Sbjct 72654 GTCAATGCAGCGTGGTAGATGGTCTCGAAGATCTGAATGTTCAGCTGCTTGGCCTCAGGG 72595 Query 22808 CTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCG 22867 |||| | |||| || | || ||| || || || | ||| || ||||| | |||| Sbjct 72594 GATTCGAATGGCAGTCGAAGTGCCAAGAAAGCATCAGCGAGACCTTGGACGCCGAGACCG 72535 Query 22868 ATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCG 22927 || || || | | | | || | || || || |||| || || | || || Sbjct 72534 ATAGGCCGATGTCTAAAGTTGCTCTTCTTGGCTTCTGGCACTGGGTAGTAGTTGATCTCA 72475 Query 22928 ATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCG 22987 || | |||||||||| |||||| | | | | | |||||| Sbjct 72474 ATAATCTTGTTCAAGTTCTTGGTCATGACCTGGATGGTTTCGTGGAGACGACCGAAGTCG 72415 Query 22988 TAA--ACGCCCGATT-GTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACG 23044 || || | || || | | || || | |||| ||| || |||||||| || Sbjct 72414 TACTGACCCTCGTTTTGGTCGACGAAGGACGGCAGAGCGACCGAAGCCAGATTGCAGACA 72355 Query 23045 GCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATC 23104 || |||||||| | |||||||| ||||| || || || | || |||| || Sbjct 72354 GCAACCTCGTCAGGAGCAGTGTACTCGACAATCTCAGTGCACAAGTTCGAGGACTTGATG 72295 Query 23105 GTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGC 23164 ||||| | || |||||||| |||| ||||| | ||||||||| |||||| |||| Sbjct 72294 GTGCCAAGGTTCTTCTGGTTGGACTTTCTGTTGCAAGCATCCTTGTAAAGCATGAACGGG 72235 Query 23165 GTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGT 23224 |||||||||| || | || | ||| || ||||| |||| || | | | | Sbjct 72234 TTGCCCGTCTCTGTTTGTGCTTCCAAGATAGCATACCACAGCTTCTGTGCCTTCATAGTT 72175 Query 23225 CGCACGTACCTG--CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGT 23282 | || |||| ||||| |||||| || | | | | || || || ||| | || | Sbjct 72174 TGT-CG-ACCTCGACCTTCCCTCTCGTATTTCTCGAAAAGTGCTTCGAACTCGTCGCCAT 72117 Query 23283 AACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTT 23342 | ||||| | || || |||| | |||| || | ||| |||| | || || | Sbjct 72116 AGCAGTCTGATAGACCAGGCGCCTCATTCGGGCAGAAAAGAGTCCAGTCTTGGTTCTTCT 72057 Query 23343 CAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCA 23402 | || || |||| || | ||| || ||||| ||||| ||||||| || || || | | Sbjct 72056 CCACTCGCTTCATGAACAAATCGGGGATCCACAGAGCATAGAACAAATCACGAGCTCTAA 71997 Query 23403 CCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACG 23462 ||||||| || ||| |||||| | | || || || || || || |||||||| | Sbjct 71996 CCTCCTCCTTTCCGTGATTCTTTCGGAGGTTCATGAACTCAAATACATCGGCATGCCAAG 71937 Query 23463 GCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGG 23522 |||| || || | ||| || ||||| |||||||| || || || |||||||| || |||| Sbjct 71936 GCTCAAGATAGATGGCGAAGGCGCCAGGTCTCTTGTTACCACCTTGATCGACATAGCGGG 71877 Query 23523 CCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCG 23582 | ||||||| | || || ||||| || |||||||||||||| | ||| ||| | Sbjct 71876 CGGTGTTGTCAAAGACCCTAAGCATGGGTACGAGACCGTTGGATGTACCGTTAGTGCCGG 71817 Query 23583 CCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATT 23642 | | || || | ||||| | |||||||| | | ||| ||||| || | || Sbjct 71816 CAATGTATGAGCCGGTAGCTCGGATTTTGTGAACATTCAGACCAATGCCACCAGCATTTT 71757 Query 23643 TCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGG 23702 | || ||||| || || || |||||||||||||| ||||| || ||| || || Sbjct 71756 TTGAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACCCTCTATTGAGTCTTCCTTCA 71697 Query 23703 TCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCG 23762 | ||| | ||| || || |||||||| |||| || || | || |||||| || | Sbjct 71696 TGTCGATGAGGAAGCAAGATGACATTTGTGCTTGTGGTGTGCCTGCGTTGAACAGAGTGG 71637 Query 23763 GGCTGGCGTGCGTAAAGTATCCATT-CGACATTAGATTGTACGTGTCGATGGCGGCATCA 23821 | ||| || ||||| ||| || ||||| || ||||| || |||||||| ||| Sbjct 71636 GCGAGGCATGTGTAAA-CATCTTTTGGGACATGAGGTTGTAGGTCTCGATGGCCTTTTCA 71578 Query 23822 ATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC---G 23878 ||||| |||||||| || || | | ||| ||||| | ||||| || || ||||| | Sbjct 71577 ATGTCGTCTCCGTGAATGCCTACAGAGACACGCATAAGCATGTGCTGGGGCCTCTCCCAG 71518 Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938 || | |||| | ||| | || ||||| | | || || || || ||||| || Sbjct 71517 ACTTT---TCCGTCATATTTCAGGAGGTATGATCTCTCCAAGGTCTTGAAGCCAAAGTAC 71461 Query 23939 TCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 | ||||| |||||||| |||| || ||||| || || Sbjct 71460 TGGTAGTTGAAGTCACGGTCGTAGACGATGGCAGAGTT 71423 >seq53 Length=169705 Score = 168 bits (186), Expect = 6e-37 Identities = 535/822 (65%), Gaps = 17/822 (2%) Strand=Plus/Minus Query 57582 TACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTG 57641 ||||| | || |||| ||||| ||||| | || || || |||||||| || || || Sbjct 76927 TACAAGAGAGCTCAAGCTTCGTTCTGGACTGCTGAGGAGGTCGACCTGTCCAAAGACCTC 76868 Query 57642 AGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCG 57698 ||| ||| | | ||||| || ||| | |||| || |||||| | || Sbjct 76867 CACGACTGGCACAACAAGCTCAACGACGATGAACGTTATTTCATCTCCCACGTGCTCGCC 76808 Query 57699 TTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAA 57758 || ||||| || || || || || || |||||||| | |||| | || || ||| Sbjct 76807 TTCTTCGCTGCCTCTGACGGCATCGTCAACGAGAACCTCCTCGAGCGCTTCTCTGGTGAA 76748 Query 57759 GTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCAT 57818 || ||||| | || || ||||||| || || || || | || || ||| | || Sbjct 76747 GTCCAAGTTCCCGAAGCTCGATGCTTCTATGGCTTCCAGATCATGATGGAGAACATCCAC 76688 Query 57819 TCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAAC-GTAG 57877 || || ||||| | ||||| || || ||||||||||| | | |||| | ||| Sbjct 76687 TCCGAGATGTACAGCTTGCTCATTGACACATACGTGAAGGAGCAAAAGCAGAAGCAGTA- 76629 Query 57878 ACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAA 57937 |||||| |||| ||||| ||||| || ||| |||||||| || ||| | | Sbjct 76628 CCTGTTCGACGCTATCGACACAATCCCATGTATCAGGAAGAAGGCCGAATGGGCTCTTCG 76569 Query 57938 ATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGT 57994 |||||| | | || || ||| ||||| || | || |||| || || ||||| Sbjct 76568 ATGGATCTCA---GACAAGGAGAGCACATTCGCTCAGCGTCTCGTCGCCTTTGCTGCCGT 76512 Query 57995 CGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCT 58054 ||| ||||| ||||| || ||| ||||| | || || ||| | ||||| || || || Sbjct 76511 CGAGGGTATTTTCTTCTCCGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCT 76452 Query 58055 GATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGA 58114 ||||| || || || || |||||| | || || || |||||||| | || ||||| Sbjct 76451 CATGCCAGGTCTTACCTTCTCCAACGAACTCATCTCCCGAGACGAGGGCATGCACACTGA 76392 Query 58115 TTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGA 58174 || || ||||| | ||| ||| | | | || | |||| ||| | | Sbjct 76391 CTTCGCATGCCTCCTTCTCTCCCACCTCAACCACCGTCCATCAAAGGATGTCATTGAGAA 76332 Query 58175 CATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGC 58234 | |||| |||||| |||| ||||| | || || | || |||||||| || || || Sbjct 76331 AGTCATCATCGAGGCCGTCGGCATCGAGCAGGAATTCCTTACGGAAGCCCTCCCCGTCGC 76272 Query 58235 CATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACT 58294 || | || |||||| || | ||| |||| || ||||| || |||||| |||| Sbjct 76271 TCTGTTGGGCATGAACCATACCCTCATGAAGCAGTATATCGAGTTCGTCGCCGACCGACT 76212 Query 58295 TTTGCTCGAACTGATTGGAGAGCGTCATTACAACA---CGAAAAATCCGTTTGATTTTAT 58351 ||| || | | || || | | | ||| ||| | | || || || || || || Sbjct 76211 GTTGGTC-AGC--ATGGGCAATCCCAAGTACTACAAGGCTACCAACCCATTCGACTTCAT 76155 Query 58352 GAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 | | ||||| || | |||||||| ||||| ||||| || Sbjct 76154 GGAGAACATCTCCCTGGCCGGCAAGACTAACTTCTTCGAGAA 76113 >seq144 Length=62325 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||||| ||||||||||| ||||| |||| |||||| | ||| Sbjct 23726 ATGCAAATCTTTGTCAAGACTCTAACAGGCAAAACCATCACGCTCGAAGTTGAATCCTCC 23785 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || ||| |||||||||||| | || |||||||| Sbjct 23786 GACACAATCGACAATGTCAAGTCGAAAATCCAAGACAAGGAAGGCATTCCACCCGACCAA 23845 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||||||||| || | || ||| | || | || || ||| Sbjct 23846 CAGCGACTGATCTTCGCTGGCAAGCAACTCGAGGACGGCAGAACACTCTCAGACTACAAC 23905 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || ||||| | || ||||| || ||| | | || |||| Sbjct 23906 ATCCAGAAGGAGTCGACGTTGCACCTGGTTCTGAGATTACGAGGTGGTA 23954 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| |||| ||||| || ||||| |||| ||||| | ||| Sbjct 23498 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTCGAGGTTGAGTCATCC 23557 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | ||||| | || |||||||||||| | || || |||||| Sbjct 23558 GACACTATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAAGGAATTCCTCCTGACCAG 23617 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || ||||||||||| ||| | |||||| || | ||| || ||| Sbjct 23618 CAGAGACTGATCTTCGCTGGCAAGCAGCTTGAAGACGGCCGAACCCTCTCCGACTACAAC 23677 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || || || || ||||| || ||| | || | || |||| Sbjct 23678 ATCCAGAAGGAGTCCACCCTGCATCTTGTGCTTCGTCTCCGTGGTGGTA 23726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763558239200