Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq53 116 5e-21 >seq53 Length=169705 Score = 116 bits (128), Expect = 5e-21 Identities = 248/369 (67%), Gaps = 5/369 (1%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 |||||||| || ||||| |||||||||| || | |||||| || || || || Sbjct 76383 CATGCGAAGTCAGTGTGCATGCCCTCGTCTCGGGAGATGAGTTCGTTGGAGAAGGTAAGA 76442 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || ||||| || || ||||| || ||||| || ||||| || || || ||||| ||||| Sbjct 76443 CCTGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAGAAA 76502 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC----TGTCATG 33757 || || || || ||||||||||| | || | || | || || | |||| Sbjct 76503 ATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGC-GAATGTGCTCTCCTTGTCTGA 76561 Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 ||||| ||||||| ||||||||||| | | ||| || || || || || || | Sbjct 76562 GATCCATCGAAGAGCCCATTCGGCCTTCTTCCTGATACATGGGATTGTGTCGATAGCGTC 76621 Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877 || || || | || | || || || || || || || || | | || ||||| Sbjct 76622 GAACAGGTACTGCTTCTGCTTTTGCTCCTTCACGTATGTGTCAATGAGCAAGCTGTACAT 76681 Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937 || || || ||||| || || ||||| || || ||||| |||| ||| |||| || Sbjct 76682 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGAGCTTCGGGAAC 76741 Query 33938 CTGCACTTC 33946 || ||||| Sbjct 76742 TTGGACTTC 76750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629813584912800