Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq52 167 3e-36 >seq52 Length=173047 Score = 167 bits (184), Expect = 3e-36 Identities = 633/976 (65%), Gaps = 22/976 (2%) Strand=Plus/Minus Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795 || || || |||||||| || || || ||||| | || | | | || | | |||||| Sbjct 72378 GCGACCGAAGCCAGATTGCAGACAGCAACCTCGTCAGGAGCAGTGTACTCGACAATCTCA 72319 Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855 ||||| | || |||||||||| || | || | || || |||| |||| || Sbjct 72318 GTGCACAAGTTCGAGGACTTGATGGTGCCAAGGTTCTTCTGGTTGGACTTTCTGTTGCAA 72259 Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 |||||||| ||||| ||||| || | || || || | || | ||| | || || | | Sbjct 72258 GCATCCTTGTAAAGCATGAACGGGTTGCCCGTCTCTGTTTGTGCTTCCAAGATAGCATAC 72199 Query 65916 CAGACGACTC-GAGCCTTTATTATAGATTTGT--ATCTCTT--TTCTCTTTCGTATAGTG 65970 || | | || | ||||| || || ||||| | ||| ||| || |||||| | Sbjct 72198 CACA-GCTTCTGTGCCTTCAT---AG-TTTGTCGACCTCGACCTTCCCTCTCGTATT-TC 72145 Query 65971 TATACAATCG-TTCGAACTCGTCTCCCCAAACATTGTCCAAT---CCAGGACATTCATCC 66026 | | || | |||||||||||| || | || ||| || ||||| |||| | Sbjct 72144 TCGAAAAGTGCTTCGAACTCGTCGCCATAG-CA--GTCTGATAGACCAGGCGCCTCATTC 72088 Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086 || || | | | ||| ||| || | || |||||| ||||| || | ||| || ||| Sbjct 72087 GGGCAGAAAAGAGTCCAGTCTTGGTTCTTCTCCACTCGCTTCATGAACAAATCGGGGATC 72028 Query 66087 CAAAGAGCTATA-AATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAG 66145 || ||||| ||| || ||||| | | |||| ||||| ||||| ||||||| || Sbjct 72027 CACAGAGC-ATAGAACAAATCACGAGCTCTAACCTCCTCCTTTCCGTGATTCTTTCGGAG 71969 Query 66146 ATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGG 66205 | | |||| | | | ||| |||||| || || | || ||||| | | ||||| Sbjct 71968 GTTCATGAACTCAAATACATCGGCATGCCAAGGCTCAAGATAGATGGCGAAGGCGCCAGG 71909 Query 66206 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 66265 | ||||| || || ||||| | || | |||||||| | | | || || | ||| || Sbjct 71908 TCTCTTGTTACCACCTTGATCGACATAGCGGGCGGTGTTGTCAAAGACCCTAAGCATGGG 71849 Query 66266 AATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATT 66325 | | ||| ||||||||||| || || |||| || || || | || || || || Sbjct 71848 TACGAGACCGTTGGATGTACCGTTAGTGCCGGCAATGTATGAGCCGGTAGCTCGGATTTT 71789 Query 66326 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 66385 || ||||| || || || || |||| ||||| | || || || | || Sbjct 71788 GTGAACATTCAGACCAATGCCACCAGCATTTTTTGAGATCATAGCACAAGTCTTGAGAGT 71729 Query 66386 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 66445 || ||||| |||||||| || ||| |||||| | || || || |||||||| Sbjct 71728 GTCGTAGATACCCTCTATTGAGTCTTCCTTCATGTCGATGAGGAAGCAAGATGACATTTG 71669 Query 66446 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 66505 | || || || || || | || || || || || |||||| |||| || Sbjct 71668 TGCTTGTGGTGTGCCTGCGTTGAACAGAGTGGGCGAGGCATGTGTAAACATCTTTTGGGA 71609 Query 66506 AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 66565 | || ||||| ||||| || || || || || | ||||| ||||| | ||| Sbjct 71608 CATGAGGTTGTAGGTCTCGATGGCCTTTTCAATGTCGTCTCCGTGAATGCCTACAGAGAC 71549 Query 66566 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTAT-TTTCAACAAGTAGG 66624 |||||| | ||||||||| || || || || ||| | | || ||||| | ||| | Sbjct 71548 ACGCATAAGCATGTGCTGGGGCCTCTCCCAGA-CTTTTCCGTCATATTTCAGGAGGTATG 71490 Query 66625 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 66684 || | ||||| || || || ||||| || | ||| ||||| || ||||| | || Sbjct 71489 ATCTCTCCAAGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTAGACGATGG 71430 Query 66685 CCGAGTTGAGTTTATC 66700 | |||||||| | ||| Sbjct 71429 CAGAGTTGAGCTCATC 71414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658168604148400