Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq144 116 4e-21 seq53 98.7 1e-15 >seq144 Length=62325 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || ||||| | || |||||||| || ||||| || |||||| Sbjct 23496 CCACCACGAAGACGGAGCACCAAGTGGAGGGTTGACTCTTTCTGGATGTTGTAGTCGCTC 23437 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| |||||||||||||| | || |||||||| || ||||| || Sbjct 23436 AAGGTGCGACCATCTTCAAGCTGTTTACCAGCGAAAATAAGACGTTGTTGGTCGGGGGGA 23377 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || |||| | || | |||||| | | ||| ||| Sbjct 23376 ATGCCCTCCTTGTCCTGGATCTTGCTCTTTACATTATCGATGGTGTCGCTAGACTCGACC 23317 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| ||| | |||||||| || | || || ||||| || ||||| Sbjct 23316 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 23270 >seq53 Length=169705 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 |||||||||| ||| || | || || ||||||| || | ||||| | |||||||| Sbjct 76321 GAGGCCGTCGGCATCGAGCAGGAATTCCTTACGGAAGCCCTCCCCGTCGCTCTGTTGGGC 76262 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 |||||| ||| | ||| |||| |||||||| || || ||| |||||||| | ||| Sbjct 76261 ATGAACCATACCCTCATGAAGCAGTATATCGAGTTCGTCGCCGACCGACTGTTGGT-CAG 76203 Query 52957 C-TCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATC 53015 | | || | || || ||||| || || ||||| || || ||| | ||||| || Sbjct 76202 CATGGGCAATCCCAAGTACTACAAGGCTACCAACCCATTCGACTTCATGGAGAACATCTC 76143 Query 53016 GCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || | ||||| || ||||| ||||||| || || || || ||| Sbjct 76142 CCTGGCCGGCAAGACTAACTTCTTCGAGAAGCGCGTCGGTGATTAC 76097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496060837592000