Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq52 232 1e-55 seq53 125 1e-23 >seq52 Length=173047 Score = 232 bits (256), Expect = 1e-55 Identities = 1217/1906 (64%), Gaps = 65/1906 (3%) Strand=Plus/Minus Query 78711 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 78770 ||| | |||||| ||||| || |||||||||| |||| || || |||||||| ||||| Sbjct 73291 GTCGACTGTGAACTGAATTGGTGCGGATGCGGCCATCGTTCGGAGGTAGTACATACCCGT 73232 Query 78771 TTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 78830 || ||||| | |||| || ||| ||||| ||| | ||| | || || Sbjct 73231 CTTGAGACCCATCTTCCAGCCAGCGAAGTGCATGGACGTAATCTTGCCCATGGTTGGCTC 73172 Query 78831 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 78890 | | |||||| || | ||| || |||||| ||||| || || | ||| || ||||| Sbjct 73171 TTTCAAATGGATGTTGAGAGACTGCGATTGATCAATGAAAGCACCACGGTCGGCGGCCAT 73112 Query 78891 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTC 78950 || |||||||| ||||| || ||||| | || || || | ||||||||| | Sbjct 73111 TTGGATGATCGTTCGTTGTGAGATCTCCCAGACGGTCTTGTAGAGGGCCTTAATATCAGC 73052 Query 78951 TGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTC 79007 ||| | ||| | || || ||||| || ||||| || || || || ||||| || | Sbjct 73051 TGGGATGTTCGGGACGTTTTGGATGGAGCCTCCATCGGCGATGATTCTGTTCTTCATGTT 72992 Query 79008 TTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAG-GAGATGC---GGATTAACTACTT 79063 || ||||| | | | || | | |||| || || || || |||| Sbjct 72991 GTCTGACCATAGAC----CAAGATCAACAAGGTCCTTGAGAAGCCAAGGGTTGACGACTT 72936 Query 79064 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATT 79123 | ||||| |||| ||| |||| |||| ||| || || || ||||| || | | | Sbjct 72935 GGAATTCGCCAGCCAAGACTCGACGAGAGTAGATGTTGGACGTGTATGGCTCGAAGCACT 72876 Query 79124 CATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTAT 79183 | || || |||||||| || | || ||||| ||||||||||| || || | | | Sbjct 72875 CGTTGTTGCCCAAAATCTGTGAGGTAGATGCAGTTGGCATAGGAGCAACGAGGAGCGAGT 72816 Query 79184 TTCTAAGACCGTA-TGATCTGATTTTATCTTTTAGAGAT-TCCCAATCCCAAAGATCAGA 79241 | | || ||| | ||| | ||| || | || | || | ||||| ||||||||||| | Sbjct 72815 TGCGAACACCATGCTGAGC-GATCTTCGCCTTCA-AGCTGTCCCAGTCCCAAAGATCGGT 72758 Query 79242 CGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAG--CGTATGATCCTGTG 79299 || || ||| ||||| || || || || || || || || ||| Sbjct 72757 AGGTGTCACTCCCCAGAGATCGTACTGAAGCTGGCC-TTGGGAGATCGGC-GAGCCTTCA 72700 Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359 ||||| |||||||| || || |||||| | || || || ||||| ||| Sbjct 72699 TATGTCTCATAAGGACCCAGCTGTTCGGCGAGCTCGCATGATGCGGTCAATGCAGCGTGG 72640 Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTATCAAATGGATA 79418 || ||||| ||||| |||| | || || | |||| || || || || ||||| | Sbjct 72639 TAGATGGTCTCGAAGATCTGAATGTTCAGCTGCTTG-GCCTCAGGGGATTCGAATGGC-A 72582 Query 79419 ATTTAAGAG--AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGT 79476 | ||| | || ||| || || || | ||||| || || | ||||||||| | |||| Sbjct 72581 GTCGAAGTGCCAAGAAA-GCATCAGCGAGACCTTGGACGCCGAGACCGATAGGCCGATGT 72523 Query 79477 CTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTG 79536 || || | | |||||||| | || || || || || || ||||| || || Sbjct 72522 CTAAAGTTGCTCTTCTTGGCTTCTGGCACTGGGTAGTAGTTGATCTCAATAATCTTGTTC 72463 Query 79537 AGATTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA-TCGT----- 79590 | ||| || || || | || | ||| || |||| | | || |||| Sbjct 72462 AAGTTCTTGGTCATGACCTGGA-----TGGTTTCGTG-GAGACGACCGAAGTCGTACTGA 72409 Query 79591 CCATCTATT------ACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACC 79644 || || || || || || ||||| || |||||||| || || || ||| Sbjct 72408 CCCTCGTTTTGGTCGACGAAGGACGGCAGAGCGACCGAAGCCAGATTGCAGACAGCAACC 72349 Query 79645 TCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCT 79704 || | || | | | || | | || |||||||| | ||| |||| ||||| || Sbjct 72348 TCGTCAGGAGCAGTGTACTCGACAATCTCAGTGCACAAGTTCGAGGACTTGATGGTGCCA 72289 Query 79705 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCA 79764 | || | || || |||| |||| || |||||||| ||||| |||||||| | || Sbjct 72288 AGGTTCTTCTGGTTGGACTTTCTGTTGCAAGCATCCTTGTAAAGCATGAACGGGTTGCCC 72229 Query 79765 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGACTT 79823 || || | || | ||| | || || | ||| | | || | ||||| || | || Sbjct 72228 GTCTCTGTTTGTGCTTCCAAGATAGCATACCACA-GCTTCTGTGCCTTCATAGT----TT 72174 Query 79824 GT--ATCTCTT--TTCTCTTTCGTATTGTGTATATAATCG-TTCGAACTCGTCTCCCCAA 79878 || | ||| ||| || ||||||| | | | || | |||||||||||| || | Sbjct 72173 GTCGACCTCGACCTTCCCTCTCGTATT-TCTCGAAAAGTGCTTCGAACTCGTCGCCATAG 72115 Query 79879 ACATCGTCTAAT---CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCC 79935 || |||| || ||||| || | || || | | | ||| ||| | | | Sbjct 72114 -CA--GTCTGATAGACCAGGCGCCTCATTCGGGCAGAAAAGAGTCCAGTCTTGGTTCTTC 72058 Query 79936 TTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCT 79994 | ||||| ||||| || | ||| || ||||| ||||| ||| || | ||| | | ||| Sbjct 72057 TCCACTCGCTTCATGAACAAATCGGGGATCCACAGAGC-ATAGAACAAATCACGAGCTCT 71999 Query 79995 ATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 80054 | |||||| ||||| ||||||| || | | |||| | | | ||| | |||||| Sbjct 71998 AACCTCCTCCTTTCCGTGATTCTTTCGGAGGTTCATGAACTCAAATACATCGGCATGCCA 71939 Query 80055 CGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCT 80114 || || | || ||||| | | || |||| ||||| || || ||||| | || | Sbjct 71938 AGGCTCAAGATAGATGGCGAAGGCGCCAGGTCTCTTGTTACCACCTTGATCGACATAGCG 71879 Query 80115 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCC 80174 |||||||| | | | || || | ||| || | | ||| ||||||||||| || || || Sbjct 71878 GGCGGTGTTGTCAAAGACCCTAAGCATGGGTACGAGACCGTTGGATGTACCGTTAGTGCC 71819 Query 80175 GGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCAT 80234 || || || || | || || || || || ||||| || || || || | Sbjct 71818 GGCAATGTATGAGCCGGTAGCTCGGATTTTGTGAACATTCAGACCAATGCCACCAGCATT 71759 Query 80235 TTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAAT 80294 ||| ||||| | || || || | || || ||||| |||||||| || || | Sbjct 71758 TTTTGAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACCCTCTATTGAGTCTTCCTT 71699 Query 80295 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 80354 ||||| | || || || |||||||| | || || || || || | || Sbjct 71698 CATGTCGATGAGGAAGCAAGATGACATTTGTGCTTGTGGTGTGCCTGCGTTGAACAGAGT 71639 Query 80355 AGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTC 80414 || || || || |||||| |||| |||| || ||||| ||||| || || ||| Sbjct 71638 GGGCGAGGCATGTGTAAACATCTTTTGGGACATGAGGTTGTAGGTCTCGATGGCCTTTTC 71579 Query 80415 TATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAAC 80474 || || | ||||| ||||| | ||||||||| | ||||||||| || || || Sbjct 71578 AATGTCGTCTCCGTGAATGCCTACAGAGACACGCATAAGCATGTGCTGGGGCCTCTCCCA 71519 Query 80475 GATCTTGTTATTTAT-TTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGT 80533 || ||| | | || ||||| | ||| ||| | ||||| || || || ||||| || | Sbjct 71518 GA-CTTTTCCGTCATATTTCAGGAGGTATGATCTCTCCAAGGTCTTGAAGCCAAAGTACT 71460 Query 80534 TGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATC 80579 ||| ||||| || ||||| | || | |||||||| | ||| Sbjct 71459 GGTAGTTGAAGTCACGGTCGTAGACGATGGCAGAGTTGAGCTCATC 71414 >seq53 Length=169705 Score = 125 bits (138), Expect = 1e-23 Identities = 250/368 (68%), Gaps = 3/368 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 |||||||| || ||||| |||||||||| || ||||||||||| || || || Sbjct 76383 CATGCGAAGTCAGTGTGCATGCCCTCGTCTCGGGAGATGAGTTCGTTGGAGAAGGTAAGA 76442 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| || || ||||| || ||||| || ||||| ||||| || || || ||||| Sbjct 76443 CCTGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAGAAA 76502 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC--AT-AACTGGCGCTGTCATGT 50136 || || || || || |||||||| || || | || | || || | |||| Sbjct 76503 ATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCGAATGTGCTCTCCTTGTCTGAG 76562 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||| ||||||| ||||||||||| | | ||| || || || || || || | Sbjct 76563 ATCCATCGAAGAGCCCATTCGGCCTTCTTCCTGATACATGGGATTGTGTCGATAGCGTCG 76622 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 || || || | || | || || || || || || || || | | || ||||| Sbjct 76623 AACAGGTACTGCTTCTGCTTTTGCTCCTTCACGTATGTGTCAATGAGCAAGCTGTACATC 76682 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 || || || ||||| || || ||||| || || ||||| |||| ||| |||| || Sbjct 76683 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGAGCTTCGGGAACT 76742 Query 50317 TGCACTTC 50324 || ||||| Sbjct 76743 TGGACTTC 76750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264221036400