Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq144 86.0 5e-12 >seq144 Length=62325 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582 || || ||||||||||| ||||||||||| || | || || || | ||||||| || Sbjct 24156 TGTAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGA-AAGAGTACGACCATCCTCCAATTG 24098 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| | | ||||| ||||| |||||| || | || |||||||| ||| || Sbjct 24097 CTTACCAGCAAAGATTAATCGCTGTTGATCCGGGGGAATACCCTCCTTGTCTTGAATCTT 24038 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||||| | ||||| || | ||| || || | || ||||| || || || Sbjct 24037 GGACTTGACGTTGTCAATGGTGTCTGAAGATTCGACTTCCAAAGTAATGGTCTTTCCAGT 23978 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 ||||| || |||||||||||||| Sbjct 23977 AAGAGTCTTGACAAAAATCTGCAT 23954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421248581660510