Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq144 114 1e-20 >seq144 Length=62325 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||||| ||| | |||| ||| | || ||||| || | ||| || ||| Sbjct 24180 CCTCCTCTCAGTCGGAGAACCAGGTGTAGCGTGCTCTCCTTCTGAATGTTGTAGTCGG-- 24123 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || || || |||||||| || || || |||||||||||| || ||||| || | Sbjct 24122 AAAGAGTACGACCATCCTCCAATTGCTTACCAGCAAAGATTAATCGCTGTTGATCCGGGG 24063 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 ||||||| || ||||| | ||| || | ||||||| | | | ||||| | |||| Sbjct 24062 GAATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTGTCAATGGTGTCTGAAGATTCGA 24003 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || ||||| |||||||||||||| || ||||| |||||||| Sbjct 24002 CTTCCAAAGTAATGGTCTTTCCAGTAAGAGTCTTGACAAAAATCTGCAT 23954 Score = 107 bits (118), Expect = 2e-18 Identities = 170/242 (70%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || |||| |||| || |||| |||||| || || ||||| || | Sbjct 23965 AAAAATCTGCATACCACCTCGTAATCTCAGAACCAGGTGCAACGTCGACTCCTTCTGGAT 23906 Query 94828 GTTATAATCGCTCATAGTGTT--GGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||| || || | | |||||| | ||||| || || || || | ||||| | || Sbjct 23905 GTTGTAGTC--TGAGAGTGTTCTGCCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGC 23848 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || || || || ||||| ||||| ||||| | ||||| | |||||| | ||| ||| Sbjct 23847 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGGATTTTCGACTTGACATTGTCGATTGTG 23788 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 || | | || || || | |||||||||||| || || ||||| || |||||||| ||| Sbjct 23787 TCGGAGGATTCAACTTCGAGCGTGATGGTTTTGCCTGTTAGAGTCTTGACAAAGATTTGC 23728 Query 95006 AT 95007 || Sbjct 23727 AT 23726 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || ||||| || || | ||||| | ||| ||||| || |||||||| ||||| ||| Sbjct 23652 TCTTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCAGGAGGAATTCCTTCCTTG 23593 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || ||||||| | ||| |||||| | || || || | |||||| Sbjct 23592 TCCTGAATCTTGCTCTTGACGTTGTCGATAGTGTCGGATGACTCAACCTCGAGAGTGATG 23533 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| | || ||||| ||||||||||| Sbjct 23532 GTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 23498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448288342143600