Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq214 168 1e-37 seq31 109 9e-20 >seq214 Length=21618 Score = 168 bits (186), Expect = 1e-37 Identities = 190/253 (75%), Gaps = 1/253 (0%) Strand=Plus/Minus Query 16447 CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCG 16506 ||||| ||||||||| |||||||| || || ||||||||||| ||||| ||||| ||||| Sbjct 18659 CAGAT-TCTTCGAGACAACATCCAGGGTATTACCAAGCCAGCCATCCGACGTCTTGCTCG 18601 Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAA 16566 ||| ||||| || |||||| |||| | || |||| ||||||| |||| |||| | || Sbjct 18600 TCGAGGTGGTGTGAAGCGTATCTCAGCCATGATCTACGAAGAGACACGTGGTGTTCTCAA 18541 Query 16567 GATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 | ||||||| || | || || | ||||||| || || || |||||||| || | || Sbjct 18540 GTCCTTCCTCGAGTCGGTCATTCGTGATGCTGTCACATACACTGAGCACGCCAAGAGAAA 18481 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGG 16686 ||||||||| || | ||| | || ||||| |||| | || ||||| | | || || Sbjct 18480 GACTGTCACATCTCTTGATGTTGTTTATGCTCTGAAGAGACAGGGCCGAACACTGTACGG 18421 Query 16687 TTTTGGAAGTTAA 16699 ||| || ||||| Sbjct 18420 TTTCGGTGGTTAA 18408 >seq31 Length=211297 Score = 109 bits (120), Expect = 9e-20 Identities = 99/122 (81%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||||| | ||||| |||||||| || ||||||||||||||||| Sbjct 130011 GCCAAGCGACACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACCAAGCCAGCTAT 130069 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| ||||| | ||||| ||||||||| | |||| || |||| ||||||| Sbjct 130070 CCGTCGTCTTGCTCGAAGAGGTGGTGTCAAGCGTATTTCTGCCATGATCTACGAAGAGAG 130129 Query 16552 TC 16553 || Sbjct 130130 TC 130131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074733703430