Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq144 96.9 3e-15 seq53 93.3 4e-14 >seq144 Length=62325 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || || || || | ||||| || | |||||| | || | || || Sbjct 23266 CAAGATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGTC 23325 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | |||||||||||| | || || ||||| ||||| || || || || ||||| Sbjct 23326 TAGCGACACCATCGATAATGTAAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCCGA 23385 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 |||||| | || |||| || || ||||| || ||||||| | | | | | |||||||| Sbjct 23386 CCAACAACGTCTTATTTTCGCTGGTAAACAGCTTGAAGATGGTCGCACCTTGAGCGACTA 23445 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || ||||| || || |||| |||| || Sbjct 23446 CAACATCCAGAAAGAGTCAACCCTCCACTTGGTGCT 23481 >seq53 Length=169705 Score = 93.3 bits (102), Expect = 4e-14 Identities = 530/830 (64%), Gaps = 43/830 (5%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || || || || || || || || ||||||||||| | || || ||||| | Sbjct 76094 CTGGTAATCACCGACGCGCTTCTCGAAGAAGTTAGTCTTGCCGGCCAGGGAGATGTTCTC 76153 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | || ||| | | |||| | ||||| || |||||| Sbjct 76154 CATGAAGTCGAATGGGTTGGTAGCCTTGTAGTACTTGGGATTGCCCATGCTGACCAACAG 76213 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820 ||| || || || |||||||| || | |||| | | | ||||||||||||| || Sbjct 76214 TCGGTCGGCGACGAACTCGATATACTGCTTCATGAGGGTATG-GTTCATGCCCAACAGAG 76272 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAA--ACAT 119878 |||| || | || | |||| ||| |||| || ||| |||| || || | | || | Sbjct 76273 CGACGGGGAGGGCTTCCGTAAGGAATTCCTGCTCGATGCCGACGGCCTCGATGATGACTT 76332 Query 119879 ACTCA---ACA-CCTTGGTCTTGGAGAGCTTGTTCTTTTCGGGAATATATTTATTGTAGT 119934 |||| ||| |||| | |||| | | ||| | || | | || Sbjct 76333 TCTCAATGACATCCTT--TGATGGA-CGGTGGTTGAGGTGGG----------AGAGAAG- 76378 Query 119935 ATAGACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAG 119994 || || || ||||| ||||| | || ||||||| ||| |||||||||||| | | | Sbjct 76379 -GAGGCATGCGAAGTCAGTGTGCATGCCCTCGTCTCGGGAGATGAGTTCGTTGGAGAAGG 76437 Query 119995 TCAAGCCGGGTA-GAGCTCCTTTTTTCGAGTCTTTGATATAGTAGATTGCAGCAAAACTA 120053 | | || || | ||| ||| ||| |||| || |||| | ||||| Sbjct 76438 TAAGACCTGGCATGAG-ACCTCGCTTC------TTGAGCCAGAAGATGGAGGCAAACGAG 76490 Query 120054 CCAGaaaaaaaGACGCCTTCGACGATAGCAAAAGCGACCATGCGTTCGGCGAATGTG-GC 120112 || || || || | || |||||| |||||| ||||| | || | ||||||||| | Sbjct 76491 CCGGAGAAGAAAATACCCTCGACGGCAGCAAAGGCGACGAGACGCTGAGCGAATGTGCTC 76550 Query 120113 AGATTGATTTTCGATCCATTTTTGAGCCCAAGCCGCCTTCTGCTTGACACTATCTATATG 120172 ||| | | ||||||| ||||||| | ||||||| | ||| || || Sbjct 76551 TCCTTG-TCTGAGATCCATCGAAGAGCCCATTCGGCCTTCTTCCTGATACATGGGATTGT 76609 Query 120173 CTCGATCGCATTCAAAA--TCCTGTCGCATTCTTGGGGATCTTTAATGTATTCGACGACA 120230 ||||| || | || | | ||| | | ||| | || || | |||| | | | Sbjct 76610 GTCGATAGCGTCGAACAGGTACTG-CTTCTGCTT-TTGCTCCTTCACGTATGTGTCAATG 76667 Query 120231 AGAATGTTATACATTTCCGTGTGAACACACTCAATGAATGTCTGTTGCGCATAGAAAAAA 120290 || | | | ||||| || | ||| | ||| || | |||| ||||||| | Sbjct 76668 AGCAAGCTGTACATCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCAT 76727 Query 120291 CTAGCTTC--CAATTCGGGC-ACGGCGGATTGCATGTGCTCGATGATGTTAGTGTTCACG 120347 | |||||| || | || | | | || | | |||||| || ||| ||| ||| Sbjct 76728 CGAGCTTCGGGAACTTGGACTTCACCAGA---GAAGCGCTCGAGGAGGTTCTCGTTGACG 76784 Query 120348 ATGACGTCGGCGGCAGCGAAAAACGCGAGAACGTGCTTAAGAAAAAATCGTTCTTTATCG 120407 ||| |||| | ||||||||| || ||||| ||||| | ||| | ||||| | ||| Sbjct 76785 ATGCCGTCAGAGGCAGCGAAGAAGGCGAGCACGTGGGAGATGAAATAACGTTCATCGTCG 76844 Query 120408 TTCAGTTTTTTGTTCCAATCGTCAAAGTCCTTGGACATGTCGATCTCTTC 120457 || || || |||| ||| |||| | ||| ||||||| ||||| ||| || Sbjct 76845 TTGAGCTTGTTGTGCCAGTCGTGGAGGTCTTTGGACAGGTCGACCTCCTC 76894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659348527200