Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq52 320 4e-82 >seq52 Length=173047 Score = 320 bits (354), Expect = 4e-82 Identities = 1071/1643 (65%), Gaps = 58/1643 (4%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || || ||| |||| || ||| ||| || || || | | |||| ||||| ||| Sbjct 71621 TTTACACATGCCTCGCCCACTCTGTTCAACGCAGGCACACCACAAGCACAAATGTCATCT 71680 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || || || |||||||||| ||||| || |||| | Sbjct 71681 TGCTTCCTCATCGACATGAAGGAAGACTCAATAGAGGGTATCTACGACACTCTCAAGACT 71740 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 |||||| | || || || ||||| || || |||||| | | ||||| | || || Sbjct 71741 TGTGCTATGATCTCAAAAAATGCTGGTGGCATTGGTCTGAATGTTCACAAAATCCGAGCT 71800 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTC 363784 || | | |||||| |||||| || ||| || || || || || ||||||||| Sbjct 71801 ACCGG-CTCATACATTGCCGGCACTAACGG-TACATCCAACGGTCTCGTACCCATGCTTA 71858 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 | || |||||||| || || | || ||||| || ||||| ||| | || || | Sbjct 71859 GGGTCTTTGACAACACCGCCCGCTATGTCGATCAAGGTGGTAACAAGAGACCTGGCGCCT 71918 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 | || || ||||| |||||| ||||||||| | |||||||| | | ||||| || | Sbjct 71919 TCGCCATCTATCTTGAGCCTTGGCATGCCGATGTATTTGAGTTCATGAACCTCCGAAAGA 71978 Query 363905 A-CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 | ||||| ||| ||||| | | || |||||| |||||||||| || ||| | | || Sbjct 71979 ATCACGG-AAAGGAGGAGGTTAGAGCTCGTGATTTGTTCTATGCTCTGTGGATCCCCGAT 72037 Query 363964 CATTTTATGAAGCGCGTGGAGGC-AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATG 364022 || |||||||| |||||| | |||| | || | || || ||||| | || Sbjct 72038 TTGTTCATGAAGCGAGTGGAGAAGAACCAAGACT-GGACTCTTTTCTGCCCGAATGAGGC 72096 Query 364023 TCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA 364080 || ||||| || || || ||||| | |||| | | || || | ||| || || || Sbjct 72097 GCCTGGTCTATCAGACTGCTATGGCG--ACGAGTTCGAAGCACTTTTCGAGAAATACGA- 72153 Query 364081 TCGGAGGGAAAGGC----TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCAT 364136 ||||||| | | ||| | || || ||||||||||| |||| ||| ||| | Sbjct 72154 ---GAGGGAAGGTCGAGGTCGACAAACTATGAAGGCACAGAAGCTGTGGTATGCTATCTT 72210 Query 364137 GGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAA 364196 ||| | || | ||||| || | || | ||| | ||||| ||| | |||||| | || Sbjct 72211 GGAAGCACAAACAGAGACGGGCAACCCGTTCATGCTTTACAAGGATGCTTGCAACAGAAA 72270 Query 364197 GTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGA 364256 |||||||||| || ||||||| || || || ||| | || || |||||| | || Sbjct 72271 GTCCAACCAGAAGAACCTTGGCACCATCAAGTCCTCGAACTTGTGCACTGAGATTGTCGA 72330 Query 364257 ATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTT 364316 ||||| ||||| |||||| ||| || || || || || ||| |||| || ||| | || Sbjct 72331 GTACACTGCTCCTGACGAGGTTGCTGTCTGCAATCTGGCTTCGGTCGCTCTGCCGTCCTT 72390 Query 364317 TGT------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGC 364370 || ||| || ||| | ||| | | ||| | || |||| ||| | Sbjct 72391 CGTCGACCAAAACGAGGGTCAGTACGACTTCGGTCGTCTCCACGA---AACC-ATCCAGG 72446 Query 364371 TACTTG--CAAT--CTCGA-CAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCC 364425 | | || ||| || || |||| |||| || | || || || ||| | || |||||| Sbjct 72447 T-CATGACCAAGAACTTGAACAAGATTATTGAGATCAACTACTACCCAGTGCCAGAAGCC 72505 Query 364426 GAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTT 364485 || || | | ||||| || || ||||| || || || || |||||||| | | Sbjct 72506 AAGAAGAGCAACTTTAGACATCGGCCTATCGGTCTCGGCGTCCAAGGTCTCGCTGATGCT 72565 Query 364486 TTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATC 364545 || || || || |||| || || ||||| || || || | ||||| Sbjct 72566 TTCTTGGCACTTCGACTGCCATTCGAATCCCCTGAGGCCAAGCAGCTGAACATTCAGATC 72625 Query 364546 TTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGA 364605 || || || || || || ||| |||| || || || || | || || ||| Sbjct 72626 TTCGAGACCATCTACCACGCTGCATTGACCGCATCATGCGAGCTCGCCGAACAGCTGGGT 72685 Query 364606 AAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGG 364665 || || ||||| || || || | || || || | | |||| ||||| ||| Sbjct 72686 CCTTATGAGACATATGAAGGCTCGCCGATCTCCCAAGGCCAGCTTCAGTACGATCTCTGG 72745 Query 364666 AATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGA----- 364720 || || || | | | ||| ||||||| | | | || | |||| Sbjct 72746 GGAGTGACACCTACCGATCTTTGGGACTGGGACA------GCTTGAAGGCGAAGATCGCT 72799 Query 364721 -AGCATGGTACTCGCAACTC---CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCA 364776 |||||||| ||||||||| ||||||| || || ||||| || || ||||| || Sbjct 72800 CAGCATGGTGTTCGCAACTCGCTCCTCGTT---GCTCCTATGCCAACTGCATCTACCTCA 72856 Query 364777 CAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGG 364836 ||||| | || ||||||||||||||||| || | || ||| | || || || || Sbjct 72857 CAGATTTTGGGCAACAACGAGTGCTTCGAGCCATACACGTCCAACATCTACTCTCGTCGA 72916 Query 364837 GTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGC 364896 || | | || ||||| | || || || | || ||||||| ||| || | Sbjct 72917 GTCTTGGCTGGCGAATTCCAAGTCGTCAACCCTTGGCTTCTCAAGGACCTTGTTGATCTT 72976 Query 364897 GGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAAC 364956 || || ||| |||| |||||||||| |||||||||| | || || | || ||| Sbjct 72977 GGTCTATGGTCAGACAACATGAAGAACAGAATCATCGCCGATGGAGGCTCCATCCAAAAC 73036 Query 364957 ATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATG 365016 | || | |||| ||| | ||| | | ||||| ||||| ||||| || || Sbjct 73037 GTCCCGAACATCCCAGCTGATATTAAGGCCCTCTACAAGACCGTCTGGGAGATCTCACAA 73096 Query 365017 CGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTT 365076 ||||| |||| | ||||| ||||| || |||||||| || ||| ||||| | Sbjct 73097 CGAACGATCATCCAAATGGCCGCCGACCGTGGTGCTTTCATTGATCAATCGCAGTCTCTC 73156 Query 365077 AACGT--ATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGT 365134 ||| | ||| ||| |||||||| | |||| |||| |||||||| ||| || | Sbjct 73157 AACATCCATT--TGAAAGAGCCAACCATGGGCAAGATTACGTCCATGCACTTCGCTGGCT 73214 Query 365135 GGAAATCCGGTCTTAAGACAGGT 365157 |||| ||||| ||||| ||| Sbjct 73215 GGAAGATGGGTCTCAAGACGGGT 73237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303345083398820