Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Knufia_20petricola_20[genbank_20GCA_5F002225475.1_202017-07-25] 510 sequences; 27,731,162 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq53 136 4e-27 seq144 122 8e-23 seq125 93.3 4e-14 seq130 87.8 2e-12 >seq53 Length=169705 Score = 136 bits (150), Expect = 4e-27 Identities = 312/459 (68%), Gaps = 17/459 (4%) Strand=Plus/Minus Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 || ||||| ||||| | || |||||||| || ||||| | || || || ||| Sbjct 76546 ACATTCGCTCAGCGTCTCGTCGCCTTTGCTGCCGTCGAGGGTATTTTCTTCTCCGGCTCG 76487 Query 46204 TTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262 |||||| ||||||| | |||| || | ||| | ||||||| || || || || ||| Sbjct 76486 TTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTC-TCATGCCAGGTCTTACCTTCTCCAA 76428 Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTC-TACTATAACA 46321 ||| || || || || ||||||||| |||| || ||||| || || ||| | || | || Sbjct 76427 CGAACTCATCTCCCGAGACGAGGGCATGCACACTGACTTCGCATGCCTCCTTCTCTCCCA 76368 Query 46322 CTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCT-GAGCATGT--TCAAGGAGGCGG 46378 | | | || | | | | | | || | ||| | || ||| ||||| | Sbjct 76367 C-------CTCAACCACCGTCCATCAAAGGATGTCATTGAGAAAGTCATCATCGAGGCCG 76315 Query 46379 TGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACG 46438 | | ||| ||| |||| || |||||| || || |||| || ||| ||||||||||| Sbjct 76314 TCGGCATCGAGCAGGAATTCCTTACGGAAGCCCTCCCCGTCGCTCTGTTGGGCATGAACC 76255 Query 46439 C-ACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCAC 46497 || ||| || | || |||||||| || || ||||||||| | || |||| | Sbjct 76254 ATACCCTCATGAAGC-AGTATATCGAGTTCGTCGCCGACCGACTGTTGGT-CAGCATGGG 76197 Query 46498 CAG-CCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGA 46556 || || ||| | | | || ||| ||||| || || ||| | ||||||||||||| Sbjct 76196 CAATCCCAAGTACTACAAGGCTACCAACCCATTCGACTTCATGGAGAACATCTCCCTGGC 76137 Query 46557 GGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||| ||||| || ||||| ||||||||||| || || Sbjct 76136 CGGCAAGACTAACTTCTTCGAGAAGCGCGTCGGTGATTA 76098 >seq144 Length=62325 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | ||| | ||| |||||||| || |||||||| ||| Sbjct 23724 CCACCACGGAGACGAAGCACAAGATGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 23665 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || ||||||||||| ||| |||| | | ||||||||| ||||| Sbjct 23664 AGGGTTCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGTCTCTGCTGGTCAGGAGGA 23605 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| || || ||||| | || | ||| |||| ||||| | Sbjct 23604 ATTCCTTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATAGTGTCGGATGACTCAACC 23545 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || | || || ||||| |||||||| Sbjct 23544 TCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 23498 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || || | ||| || | || | ||||||||||| || |||||||| || Sbjct 23952 CCACCTCGTAATCTCAGAACCAGGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCTGAG 23893 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | |||||| || |||||||| ||| |||| | ||||| ||||| || || Sbjct 23892 AGTGTTCTGCCGTCCTCGAGTTGCTTGCCAGCGAAGATCAGTCGCTGTTGGTCGGGTGGA 23833 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||||||| ||||| | || | || |||| ||| || | Sbjct 23832 ATGCCTTCCTTGTCTTGGATTTTCGACTTGACATTGTCGATTGTGTCGGAGGATTCAACT 23773 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | |||||| || |||||||| || || || || ||||| Sbjct 23772 TCGAGCGTGATGGTTTTGCCTGTTAGAGTCTTGACAAAGATTTGCAT 23726 >seq125 Length=76066 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||| |||||||| || |||||||| || Sbjct 47311 CCACCTCGAAGACGGAGTACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 47370 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||||||||| ||| |||| || ||||||||||| || ||| Sbjct 47371 AGAGTTCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGG 47430 Query 131128 ATTCCTTCTTTGTC 131141 || ||||| ||||| Sbjct 47431 ATGCCTTCCTTGTC 47444 >seq130 Length=70983 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| | ||| || ||| || |||||||| || ||| ||| Sbjct 37990 CCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGA 38049 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||||||||| || ||||| || || ||||| ||| || ||||| | | Sbjct 38050 TCAATCGCTGCTGGTCGGGTGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 38109 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||||| || | ||| | ||| || || || || || || |||| Sbjct 38110 CGATGGTGTCTGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTAACGA 38169 Query 131225 A 131225 | Sbjct 38170 A 38170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472009790918400